RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 WNT7BP56706 349 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 TLR1Q15399 786 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 GPR158Q5T848 1215 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 DENND5AQ6IQ26 1287 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 CHST15Q7LFX5 561 aaPredicted RBP11.54□□□□□ -0.56
VPS33A-201ENST00000267199 C12orf43Q96C57 262 aaKnown RBP11.54□□□□□ -0.56
VPS33A-201ENST00000267199 MOCOSQ96EN8 888 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 REXO5Q96IC2 774 aaKnown RBP11.54□□□□□ -0.56
VPS33A-201ENST00000267199 EXOC2Q96KP1 924 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 HOPXQ9BPY8 73 aaPredicted RBP11.54□□□□□ -0.56
VPS33A-201ENST00000267199 TUBA8Q9NY65 449 aaPredicted RBP11.54□□□□□ -0.56
VPS33A-201ENST00000267199 UBA2Q9UBT2 640 aaPredicted RBP11.54□□□□□ -0.56
VPS33A-201ENST00000267199 ZNHIT2Q9UHR6 403 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 OAZ3Q9UMX2 235 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 COL1A2P08123 1366 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 UBR2Q8IWV8 1755 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 PPEF2O14830 753 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 TREHO43280 583 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 SLC22A3O75751 556 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 THRBP10828 461 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 IMPDH2P12268 514 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 CHI3L1P36222 383 aaPredicted RBP11.54□□□□□ -0.56
VPS33A-201ENST00000267199 PIK3CGP48736 1102 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 AIF1P55008 147 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 LSAMPQ13449 338 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 TRIP4Q15650 581 aaPredicted RBP11.54□□□□□ -0.56
VPS33A-201ENST00000267199 PEBP4Q96S96 227 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 FEM1AQ9BSK4 669 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 IRS2Q9Y4H2 1338 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 YJEFN3A6XGL0 299 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 KLF11O14901 512 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 KRT20P35900 424 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 TAS2R39P59534 338 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 MERTKQ12866 999 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 PTPRNQ16849 979 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 MYLK3Q32MK0 819 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 FGD3Q5JSP0 725 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 ESRP1Q6NXG1 681 aaKnown RBP11.54□□□□□ -0.56
VPS33A-201ENST00000267199 C15orf39Q6ZRI6 1047 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 TMEM132CQ8N3T6 1108 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 ZBTB8BQ8NAP8 495 aaPredicted RBP11.54□□□□□ -0.56
VPS33A-201ENST00000267199 CLHC1Q8NHS4 586 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 FAM45AQ8TCE6 357 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 ZYG11BQ9C0D3 744 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 RPRD1BQ9NQG5 326 aaKnown RBP11.54□□□□□ -0.56
VPS33A-201ENST00000267199 SAMHD1Q9Y3Z3 626 aaKnown RBP11.54□□□□□ -0.56
VPS33A-201ENST00000267199 MYBPHLA2RUH7 354 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 SCAMP3O14828 347 aaKnown RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 GRIN3BO60391 1043 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 GMPRP36959 345 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 STT3AP46977 705 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 IL2P60568 153 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 MRPS6P82932 125 aaKnown RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 OLIG2Q13516 323 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 TP53BP2Q13625 1128 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 CPSF7Q8N684 471 aaKnown RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 OR2T12Q8NG77 320 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 TMEM169Q96HH4 297 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 SNX27Q96L92 541 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 GBA3Q9H227 469 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 PNPLA8Q9NP80 782 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 ADGRE2Q9UHX3 823 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 CNOT6Q9ULM6 557 aaKnown RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 SMIM35A0A1B0GVV1 85 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 TBKBP1A7MCY6 615 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 A8MX80 341 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 RGS20O76081 388 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 CNPP09543 421 aaKnown RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 IDO1P14902 403 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 CCR10P46092 362 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 CCT3P49368 545 aaKnown RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 FCGRTP55899 365 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 INO80DQ53TQ3 878 aaPredicted RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 DCLRE1AQ6PJP8 1040 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 TMEM110Q86TL2 294 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 OR9I1Q8NGQ6 314 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 DQX1Q8TE96 717 aaKnown RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 HNRNPABQ99729 332 aaKnown RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 BCO2Q9BYV7 579 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 IKZF3Q9UKT9 509 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 A0A088AWK7 358 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 H3BMM5 538 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 PSMD11O00231 422 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 ALDH1A1P00352 501 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 AZGP1P25311 298 aaKnown RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 WDTC1Q8N5D0 677 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 ZFP28Q8NHY6 868 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 C1orf21Q9H246 121 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 PCDHB8Q9UN66 801 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 KCNH4Q9UQ05 1017 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 COPG1Q9Y678 874 aaKnown RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 MYO18AQ92614 2054 aaKnown RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 H7C4K7 107 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 TBX1O43435 398 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 RPLP2P05387 115 aaKnown RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 CD52P31358 61 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 KPNA1P52294 538 aaPredicted RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 SYPL2Q5VXT5 272 aa11.53□□□□□ -0.56
VPS33A-201ENST00000267199 PIWIL1Q96J94 861 aaKnown RBP11.53□□□□□ -0.56
VPS33A-201ENST00000267199 XYLT2Q9H1B5 865 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms