RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 PPIL2Q13356 520 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 USP41Q3LFD5 358 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 ZBED5Q49AG3 693 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 DNAJC14Q6Y2X3 702 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-201ENST00000263856 HM13Q8TCT9 377 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 MAML3Q96JK9 1138 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 EXOC2Q96KP1 924 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 TEX37Q96LM6 180 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 CDK15Q96Q40 435 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 CYP2S1Q96SQ9 504 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 IL12RB2Q99665 862 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 CCM2LQ9NUG4 571 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-201ENST00000263856 SQORQ9Y6N5 450 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 SMIM35A0A1B0GVV1 85 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 CLASP2O75122 1294 aaKnown RBP12.36□□□□□ -0.43
CHMP3-201ENST00000263856 GOT2P00505 430 aaKnown RBP12.36□□□□□ -0.43
CHMP3-201ENST00000263856 ALBP02768 609 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 SLC6A2P23975 617 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 DNAJB2P25686 324 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 GSK3BP49841 420 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 CSRP3P50461 194 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 HERVK_113P63132 956 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 IL1RL1Q01638 556 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 PIGFQ07326 219 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 BFSP2Q13515 415 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 IMPG1Q17R60 797 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 SLC44A4Q53GD3 710 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 GRAMD4Q6IC98 578 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 ABRAXAS1Q6UWZ7 409 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 BHLHA9Q7RTU4 235 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 METTL23Q86XA0 190 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 ANKFN1Q8N957 763 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 TNIP2Q8NFZ5 429 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 NPLOC4Q8TAT6 608 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 TOP1MTQ969P6 601 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 PPM1MQ96MI6 270 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 NPLQ9BXD5 320 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-201ENST00000263856 ERVK-6Q9BXR3 956 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 DGCR6LQ9BY27 220 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 CCDC90BQ9GZT6 254 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 CCDC68Q9H2F9 335 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 AGO3Q9H9G7 860 aaKnown RBP12.36□□□□□ -0.43
CHMP3-201ENST00000263856 ZFYVE28Q9HCC9 887 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 LTB4R2Q9NPC1 389 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 INTS7Q9NVH2 962 aaKnown RBP12.36□□□□□ -0.43
CHMP3-201ENST00000263856 PKD2L2Q9NZM6 624 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 CIDEBQ9UHD4 219 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 HS3ST4Q9Y661 456 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 DGKBQ9Y6T7 804 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 MIA3Q5JRA6 1907 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 LTBP3Q9NS15 1303 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 BTBD19C9JJ37 291 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 HHLA1C9JL84 531 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 H3BMQ9 156 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 ZBTB11O95625 1053 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-201ENST00000263856 GLP2RO95838 553 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 UGT1A1P22309 533 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 UGT1A4P22310 534 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 HMOX2P30519 316 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 ADRA1AP35348 466 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 UGT1A3P35503 534 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 UGT1A5P35504 534 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 AGTR2P50052 363 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 ARPP19P56211 112 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 C21orf59P57076 290 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 UFM1P61960 85 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 PAGE3Q5JUK9 113 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 TIGD7Q6NT04 549 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-201ENST00000263856 GPR142Q7Z601 462 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 FBXO39Q8N4B4 442 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 SLC16A10Q8TF71 515 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 COG8Q96MW5 612 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 FANCEQ9HB96 536 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 SUN2Q9UH99 717 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 CDH9Q9ULB4 789 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 ACTL7AQ9Y615 435 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 A0A1W2PQH9 124 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 BMP2P12643 396 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 VARSP26640 1264 aaKnown RBP12.35□□□□□ -0.43
CHMP3-201ENST00000263856 RPS9P46781 194 aaKnown RBP12.35□□□□□ -0.43
CHMP3-201ENST00000263856 EFEMP1Q12805 493 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 TSNQ15631 228 aaKnown RBP12.35□□□□□ -0.43
CHMP3-201ENST00000263856 SIRPB2Q5JXA9 342 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 STK32CQ86UX6 486 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 LRRTM3Q86VH5 581 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 ZC3H7AQ8IWR0 971 aaKnown RBP12.35□□□□□ -0.43
CHMP3-201ENST00000263856 KLHL23Q8NBE8 558 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 CENPNQ96H22 339 aaPredicted RBP12.35□□□□□ -0.43
CHMP3-201ENST00000263856 PPP1R10Q96QC0 940 aaKnown RBP12.35□□□□□ -0.43
CHMP3-201ENST00000263856 SMIM14Q96QK8 99 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 ABHD16BQ9H3Z7 469 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 TUBB1Q9H4B7 451 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 ADARB2Q9NS39 739 aaKnown RBP12.35□□□□□ -0.43
CHMP3-201ENST00000263856 ANAPC2Q9UJX6 822 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 PDCD11Q14690 1871 aaKnown RBP12.35□□□□□ -0.43
CHMP3-201ENST00000263856 LOC285556D6RIA3 1793 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 CCDC154A6NI56 674 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 M0QZ92 97 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 DLGAP1O14490 977 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 BMP10O95393 424 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms