RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 CKLFQ9UBR5 152 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 MAP2P11137 1827 aaKnown RBP12.84□□□□□ -0.35
TTC39A-202ENST00000262676 A0A0G2JPF8 293 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 DHRS12A0PJE2 317 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 HNRNPCL3B7ZW38 293 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 HNRNPCL4P0DMR1 293 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 NR2F6P10588 404 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 RBL1P28749 1068 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 AKT2P31751 481 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 CCR3P51677 355 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 ATXN1P54253 815 aaKnown RBP12.84□□□□□ -0.35
TTC39A-202ENST00000262676 RTP1P59025 263 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 HSPA14Q0VDF9 509 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 DPYSL3Q14195 570 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 TSGA10IPQ3SY00 556 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 CRTC3Q6UUV7 619 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 ARMC10Q8N2F6 343 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 TSEN2Q8NCE0 465 aaKnown RBP12.84□□□□□ -0.35
TTC39A-202ENST00000262676 FAIM2Q9BWQ8 316 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 EIF3KQ9UBQ5 218 aaKnown RBP12.84□□□□□ -0.35
TTC39A-202ENST00000262676 TRHDEQ9UKU6 1024 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 ZNF214Q9UL59 606 aaPredicted RBP12.84□□□□□ -0.35
TTC39A-202ENST00000262676 GPSM3Q9Y4H4 160 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 PTCH2Q9Y6C5 1203 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.84□□□□□ -0.35
TTC39A-202ENST00000262676 GRXCR2A6NFK2 248 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 BANF1O75531 89 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 TBC1D25Q3MII6 688 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 ARMC12Q5T9G4 340 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 JAZF1Q86VZ6 243 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 PARGQ86W56 976 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 ZZZ3Q8IYH5 903 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 LMAN2LQ9H0V9 348 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 GDF3Q9NR23 364 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 TMLHEQ9NVH6 421 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 PSME2Q9UL46 239 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 PHF24Q9UPV7 400 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 VWDEQ8N2E2 1590 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 SLC28A1O00337 649 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 MMP3P08254 477 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 NR4A1P22736 598 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 MSX2P35548 267 aaPredicted RBP12.84□□□□□ -0.35
TTC39A-202ENST00000262676 BRCC3P46736 316 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 RARRES1P49788 294 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 ACAP2Q15057 778 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 PABPC1LQ4VXU2 614 aaKnown RBP12.84□□□□□ -0.35
TTC39A-202ENST00000262676 XKR6Q5GH73 641 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 DENND6BQ8NEG7 585 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 ETNK2Q9NVF9 386 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 GULP1Q9UBP9 304 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.84□□□□□ -0.35
TTC39A-202ENST00000262676 TMEM5Q9Y2B1 443 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 TNPO3Q9Y5L0 923 aaKnown RBP12.84□□□□□ -0.35
TTC39A-202ENST00000262676 TMEM131LA2VDJ0 1609 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 GRK5P34947 590 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 NR2C2P49116 596 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 GPR158Q5T848 1215 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 CLIP4Q8N3C7 705 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 AADATQ8N5Z0 425 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 CCDC54Q8NEL0 328 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 IL31RAQ8NI17 732 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 LRIG2O94898 1065 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 UNC5CO95185 931 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 AZGP1P25311 298 aaKnown RBP12.84□□□□□ -0.35
TTC39A-202ENST00000262676 NAB1Q13506 487 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 MCEMP1Q8IX19 187 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 ABRAQ8N0Z2 381 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 OR52K1Q8NGK4 314 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 ZNF563Q8TA94 476 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 EXOC2Q96KP1 924 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 NPAS2Q99743 824 aa12.84□□□□□ -0.35
TTC39A-202ENST00000262676 EML1O00423 815 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 ATF6P18850 670 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 PSMB4P28070 264 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 MMP13P45452 471 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 RETSATQ6NUM9 610 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 KCNT2Q6UVM3 1135 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 GPR65Q8IYL9 337 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 OR10H5Q8NGA6 315 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 NKD1Q969G9 470 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 PANX1Q96RD7 426 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 CHCHD6Q9BRQ6 235 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 WDR18Q9BV38 432 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 TRIM2Q9C040 744 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 PLK2Q9NYY3 685 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 ZNHIT2Q9UHR6 403 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 H0Y858 1186 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 ACKR2O00590 384 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 ERAL1O75616 437 aaKnown RBP12.83□□□□□ -0.36
TTC39A-202ENST00000262676 CTDNEP1O95476 244 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 PFKPQ01813 784 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 CA9Q16790 459 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 STXBP5Q5T5C0 1151 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 CXorf40AQ8TE69 158 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 CKAP2Q8WWK9 683 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 DHRS1Q96LJ7 313 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 RIPK3Q9Y572 518 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 H3BM21 787 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 AP5Z1O43299 807 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 DNTTP04053 509 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms