RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 MARCH4Q9P2E8 410 aaPredicted RBP22.58■■□□□ 1.21
MCF2L-201ENST00000261963 UXTQ9UBK9 157 aaPredicted RBP22.58■■□□□ 1.21
MCF2L-201ENST00000261963 KCTD3Q9Y597 815 aa22.58■■□□□ 1.21
MCF2L-201ENST00000261963 ZNF701M0R085 212 aaPredicted RBP22.58■■□□□ 1.2
MCF2L-201ENST00000261963 SLC7A4O43246 635 aa22.58■■□□□ 1.2
MCF2L-201ENST00000261963 WISP3O95389 354 aaPredicted RBP22.58■■□□□ 1.2
MCF2L-201ENST00000261963 FAM189BP81408 668 aa22.58■■□□□ 1.2
MCF2L-201ENST00000261963 SREBF2Q12772 1141 aa22.58■■□□□ 1.2
MCF2L-201ENST00000261963 IKBKEQ14164 716 aa22.58■■□□□ 1.2
MCF2L-201ENST00000261963 AGAP9Q5VTM2 703 aa22.58■■□□□ 1.2
MCF2L-201ENST00000261963 TMEM207Q6UWW9 146 aa22.58■■□□□ 1.2
MCF2L-201ENST00000261963 GALNT7Q86SF2 657 aa22.58■■□□□ 1.2
MCF2L-201ENST00000261963 SH3RF2Q8TEC5 729 aa22.58■■□□□ 1.2
MCF2L-201ENST00000261963 HDAC10Q969S8 669 aa22.58■■□□□ 1.2
MCF2L-201ENST00000261963 C12orf43Q96C57 262 aaKnown RBP22.58■■□□□ 1.2
MCF2L-201ENST00000261963 MFSD1Q9H3U5 465 aa22.58■■□□□ 1.2
MCF2L-201ENST00000261963 DOLKQ9UPQ8 538 aa22.58■■□□□ 1.2
MCF2L-201ENST00000261963 FRMPD3Q5JV73 1810 aa22.58■■□□□ 1.2
MCF2L-201ENST00000261963 MIA3Q5JRA6 1907 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 OR51F1A6NGY5 319 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 TMEM88BA6NKF7 163 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 ACOT8O14734 319 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 IPO13O94829 963 aaKnown RBP22.57■■□□□ 1.2
MCF2L-201ENST00000261963 C8BP07358 591 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 DPP6P42658 865 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 CDKN2DP55273 166 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 ZNF829Q3KNS6 432 aaPredicted RBP22.57■■□□□ 1.2
MCF2L-201ENST00000261963 IL23RQ5VWK5 629 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 ZNF354CQ86Y25 554 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 PCSK9Q8NBP7 692 aaKnown RBP22.57■■□□□ 1.2
MCF2L-201ENST00000261963 DDHD1Q8NEL9 900 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 SEMA6AQ9H2E6 1030 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 LOC285095A0A1B0GVY8 99 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 HTR3EA5X5Y0 456 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 TCAF2A6NFQ2 919 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 TRPC5OSA6NMA1 111 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 DRGXA6NNA5 263 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 S1PR4O95977 384 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 ARSAP15289 507 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 ZNF24P17028 368 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 YWHAQP27348 245 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 ETFBP38117 255 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 ART3Q13508 389 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 ZBED5Q49AG3 693 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 CTXN3Q4LDR2 81 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 DCDC5Q6ZRR9 648 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 PELI3Q8N2H9 469 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 OR6P1Q8NGX9 317 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 FBXO32Q969P5 355 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 THAP11Q96EK4 314 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 B3GALT6Q96L58 329 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 HIPK3Q9H422 1215 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 VWA7Q9Y334 891 aa22.57■■□□□ 1.2
MCF2L-201ENST00000261963 LDB2O43679 373 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 TADA2AO75478 443 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 HMBSP08397 361 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 GJA8P48165 433 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 PLK1P53350 603 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 CDH15P55291 814 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 SLC15A3Q8IY34 581 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 TSPAN17Q96FV3 270 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 MARCH2Q9P0N8 246 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 PSMD12O00232 456 aaPredicted RBP22.56■■□□□ 1.2
MCF2L-201ENST00000261963 SYN3O14994 580 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 IGLV3-27P01718 113 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 ACVRL1P37023 503 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 BCAP31P51572 246 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 SERINC3Q13530 473 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 MRPL58Q14197 206 aaKnown RBP22.56■■□□□ 1.2
MCF2L-201ENST00000261963 MYO1HQ8N1T3 1032 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 ATP6V1E2Q96A05 226 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 CDH7Q9ULB5 785 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 FIS1Q9Y3D6 152 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 AP4S1Q9Y587 144 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 FADS3Q9Y5Q0 445 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 TLL2Q9Y6L7 1015 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 VWA8A3KMH1 1905 aa22.56■■□□□ 1.2
MCF2L-201ENST00000261963 STX16-NPEPL1H3BU86 382 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 MUSKO15146 869 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 RAMP2O60895 175 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 ACLYP53396 1101 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 C21orf59P57076 290 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 IL10RBQ08334 325 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 TAF10Q12962 218 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 POLD3Q15054 466 aaPredicted RBP22.55■■□□□ 1.2
MCF2L-201ENST00000261963 ACAP2Q15057 778 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 C10orf120Q5SQS8 335 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 TMEM53Q6P2H8 277 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 FIBCD1Q8N539 461 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 SPPL2BQ8TCT7 592 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 CCDC126Q96EE4 140 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 CRISPLD1Q9H336 500 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 SLC27A5Q9Y2P5 690 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 TMED5Q9Y3A6 229 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 FOXD2O60548 495 aaPredicted RBP22.55■■□□□ 1.2
MCF2L-201ENST00000261963 RBP1P09455 135 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 TCN1P20061 433 aaPredicted RBP22.55■■□□□ 1.2
MCF2L-201ENST00000261963 TM4SF4P48230 202 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 KCNC1P48547 511 aa22.55■■□□□ 1.2
MCF2L-201ENST00000261963 C1QTNF8P60827 252 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms