RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CAMTA1Q9Y6Y1 1673 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 DHRS12A0PJE2 317 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 HDAC3O15379 428 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 SLC6A2P23975 617 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 RBM44Q6ZP01 1051 aaKnown RBP12.08□□□□□ -0.48
COL8A1-201ENST00000261037 OR4K2Q8NGD2 314 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 ING5Q8WYH8 240 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 KREMEN1Q96MU8 473 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 GPR20Q99678 358 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 WRAP53Q9BUR4 548 aaKnown RBP12.08□□□□□ -0.48
COL8A1-201ENST00000261037 HIPK3Q9H422 1215 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 MCUBQ9NWR8 336 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 CNOT6Q9ULM6 557 aaKnown RBP12.08□□□□□ -0.48
COL8A1-201ENST00000261037 SLC27A6Q9Y2P4 619 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 CCDC182A6NF36 153 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 E9PAM4 449 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 SUV39H1O43463 412 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 TIPRLO75663 272 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 TCEA3O75764 348 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 IDO1P14902 403 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 MYL9P24844 172 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 TIMM50Q3ZCQ8 353 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 ANXA8L1Q5VT79 327 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 CHST9Q7L1S5 443 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 HPS6Q86YV9 775 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 ZBTB2Q8N680 514 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 ATAD1Q8NBU5 361 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 CPXM1Q96SM3 734 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.08□□□□□ -0.48
COL8A1-201ENST00000261037 LMAN2LQ9H0V9 348 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 ACSS3Q9H6R3 686 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 GLOD4Q9HC38 313 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 PTPRJQ12913 1337 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.08□□□□□ -0.48
COL8A1-201ENST00000261037 A0A0J9YYE9 177 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 CCDC85CA6NKD9 419 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 PRR5-ARHGAP8B1AHC4 643 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 PSIP1O75475 530 aaKnown RBP12.08□□□□□ -0.48
COL8A1-201ENST00000261037 CHRNGP07510 517 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 SLC7A2P52569 658 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 ARHGAP8P85298 464 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 BNIP2Q12982 314 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 MADCAM1Q13477 382 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 PTPN20Q4JDL3 420 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 TAPT1Q6NXT6 567 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 PIGKQ92643 395 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 TSSK3Q96PN8 268 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 EVA1BQ9NVM1 165 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 UBAP1Q9NZ09 502 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 CRNNQ9UBG3 495 aaPredicted RBP12.08□□□□□ -0.48
COL8A1-201ENST00000261037 ADGRE2Q9UHX3 823 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 SYNPO2Q9UMS6 1093 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 BTBD3Q9Y2F9 522 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 ZFP37Q9Y6Q3 630 aaPredicted RBP12.08□□□□□ -0.48
COL8A1-201ENST00000261037 ANKRD26Q9UPS8 1709 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 RPP40O75818 363 aaKnown RBP12.07□□□□□ -0.48
COL8A1-201ENST00000261037 TRBC1P01850 177 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 UGT2B4P06133 528 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 GSTT1P30711 240 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 SSR2P43308 183 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 ATP6V0D1P61421 351 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 LPCAT4Q643R3 524 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 SPPL2CQ8IUH8 684 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 POC5Q8NA72 575 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 ATP6V1C2Q8NEY4 427 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 NEK7Q8TDX7 302 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 ARL8BQ9NVJ2 186 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 EME2A4GXA9 379 aaPredicted RBP12.07□□□□□ -0.48
COL8A1-201ENST00000261037 MAP2K7O14733 419 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 PPP1R11O60927 126 aaPredicted RBP12.07□□□□□ -0.48
COL8A1-201ENST00000261037 RPL3P39023 403 aaKnown RBP12.07□□□□□ -0.48
COL8A1-201ENST00000261037 FLT3LGP49771 235 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 HNMTP50135 292 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 ITGA7Q13683 1181 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 SF1Q15637 639 aaKnown RBP12.07□□□□□ -0.48
COL8A1-201ENST00000261037 QPCTQ16769 361 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 LSM12Q3MHD2 195 aaKnown RBP12.07□□□□□ -0.48
COL8A1-201ENST00000261037 FCRL4Q96PJ5 515 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 ZNF607Q96SK3 696 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 C3orf18Q9UK00 162 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 TMA7Q9Y2S6 64 aaKnown RBP12.07□□□□□ -0.48
COL8A1-201ENST00000261037 TRAF6Q9Y4K3 522 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 TIMM22Q9Y584 194 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 KLRG2A4D1S0 409 aaPredicted RBP12.07□□□□□ -0.48
COL8A1-201ENST00000261037 A8MUI8 341 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 QSOX1O00391 747 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 DDX3YO15523 660 aaKnown RBP12.07□□□□□ -0.48
COL8A1-201ENST00000261037 SLC26A3P40879 764 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 GLUD2P49448 558 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 MPP1Q00013 466 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 DSC2Q02487 901 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 PPM1JQ5JR12 505 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 RNASEH2BQ5TBB1 312 aaKnown RBP12.07□□□□□ -0.48
COL8A1-201ENST00000261037 TTC23Q5W5X9 447 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 ATG14Q6ZNE5 492 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 PTF1AQ7RTS3 328 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 ARHGAP22Q7Z5H3 698 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 DEPDC4Q8N2C3 294 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 AADATQ8N5Z0 425 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 CSPG4P5Q96PW8 444 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms