RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 RABGGTBP53611 331 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 DNAJB13P59910 316 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 NFATC3Q12968 1075 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 SLC12A1Q13621 1099 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 FASTKQ14296 549 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 INPP5AQ14642 412 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 DLG2Q15700 870 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 ATP6AP1Q15904 470 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 SPATS1Q496A3 300 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 EGFLAMQ63HQ2 1017 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 CES3Q6UWW8 571 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 TMEM26Q6ZUK4 368 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 CBR4Q8N4T8 237 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 SLC43A3Q8NBI5 491 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 GABPB2Q8TAK5 448 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 EFHD2Q96C19 240 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 ROPN1LQ96C74 230 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 FEM1CQ96JP0 617 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 MARK4Q96L34 752 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 TMEM209Q96SK2 561 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 IL12RB2Q99665 862 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 MLPHQ9BV36 600 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 MAGEE1Q9HCI5 957 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 TRNAU1APQ9NX07 287 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 SPATA7Q9P0W8 599 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 RUVBL2Q9Y230 463 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 TLR6Q9Y2C9 796 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 TCAF1Q9Y4C2 921 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 PCDHB5Q9Y5E4 795 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 MYO18AQ92614 2054 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 TK2O00142 265 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 MRASO14807 208 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 DLX3O60479 287 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 FOXD2O60548 495 aaPredicted RBP10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 PAGE1O75459 146 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 RASAL1O95294 804 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 JCHAINP01591 159 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 ELNP15502 786 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 CD247P20963 164 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 CCR10P46092 362 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 RXRGP48443 463 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 VASPP50552 380 aaPredicted RBP10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 HLCSP50747 726 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 ILF2Q12905 390 aaKnown RBP10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 ELAVL2Q12926 359 aaKnown RBP10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 BNIP3Q12983 259 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 SEPT6Q14141 434 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 UGP2Q16851 508 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 SLC39A12Q504Y0 691 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 TMTC4Q5T4D3 741 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 LRRC8EQ6NSJ5 796 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 PRMT9Q6P2P2 845 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 KCTD8Q6ZWB6 473 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 PIWIL4Q7Z3Z4 852 aaKnown RBP10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 PTAR1Q7Z6K3 402 aaPredicted RBP10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 SCN4BQ8IWT1 228 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 RTL3Q8N8U3 475 aaKnown RBP10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 OR13F1Q8NGS4 319 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 SCAMP5Q8TAC9 235 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 SPPL2BQ8TCT7 592 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 CANT1Q8WVQ1 401 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 ATXN7L3BQ96GX2 97 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 CENPNQ96H22 339 aaPredicted RBP10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 SCYL1Q96KG9 808 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 FCRL2Q96LA5 508 aaPredicted RBP10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 CCDC138Q96M89 665 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 AGAP2Q99490 1192 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 KIFC1Q9BW19 673 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 GPN2Q9H9Y4 310 aaPredicted RBP10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 MEAF6Q9HAF1 191 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 ENTPD7Q9NQZ7 604 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 AGPAT4Q9NRZ5 378 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 RNF186Q9NXI6 227 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 PKD2L2Q9NZM6 624 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 NCKIPSDQ9NZQ3 722 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 NEU3Q9UQ49 428 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 PLXNA3P51805 1871 aa10.8□□□□□ -0.68
CHRNA1-201ENST00000261007 ZNF839A8K0R7 811 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 F5H423 210 aaPredicted RBP10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 UBDO15205 165 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 CLOCKO15516 846 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 HOXA2O43364 376 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 NRP2O60462 931 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 BCL10O95999 233 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 ITGB1P05556 798 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 GNAO1P09471 354 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 FCGR1AP12314 374 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 FASP25445 335 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 CAPGP40121 348 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 OR1G1P47890 313 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 ATP1A4Q13733 1029 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 ARHGEF6Q15052 776 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 MAP7D1Q3KQU3 841 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 PCID2Q5JVF3 399 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 AFMIDQ63HM1 303 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 ZNF280DQ6N043 979 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 TRAF7Q6Q0C0 670 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 CYP2R1Q6VVX0 501 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 LINC00299Q6ZSB3 139 aa10.79□□□□□ -0.68
CHRNA1-201ENST00000261007 SCD5Q86SK9 330 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms