RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SEMA6DQ8NFY4 1073 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 MAN1C1Q9NR34 630 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 FRMPD4Q14CM0 1322 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 C2orf71A6NGG8 1288 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 LCMT2O60294 686 aaKnown RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 MOCS2O96007 188 aaPredicted RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 LDLRP01130 860 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF182P17025 639 aaPredicted RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 GLDCP23378 1020 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 HOXA1P49639 335 aaPredicted RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 SPDYE7PQ495Y7 208 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 ACAD10Q6JQN1 1059 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 OR6Q1Q8NGQ2 317 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 DCAF4Q8WV16 495 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC44A1Q8WWI5 657 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 C9orf72Q96LT7 481 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 MROQ9BYG7 248 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 OPA3Q9H6K4 179 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 RC3H2Q9HBD1 1191 aaKnown RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 DPP3Q9NY33 737 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 TJP2Q9UDY2 1190 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 CD300AQ9UGN4 299 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 MAD2L2Q9UI95 211 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 NAALADL1Q9UQQ1 740 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 UBE2QL1A1L167 161 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 WDR64B1ANS9 1081 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 ALDH1A2O94788 518 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 ADAP00813 363 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 CRKP46108 304 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 SAPCD1Q5SSQ6 148 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 SHEQ5VZ18 495 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 CIAPIN1Q6FI81 312 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 CFAP161Q6P656 301 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 C16orf59Q7L2K0 433 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 GPR180Q86V85 440 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 CAMK1GQ96NX5 476 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 GAS2L1Q99501 681 aaPredicted RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 RBBP8Q99708 897 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 TMEM121Q9BTD3 319 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 HIPK2Q9H2X6 1198 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 CDC42EP4Q9H3Q1 356 aaKnown RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 SEMA4AQ9H3S1 761 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 FAM83DQ9H4H8 585 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 NOL11Q9H8H0 719 aaKnown RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 TREM1Q9NP99 234 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 KLHL11Q9NVR0 708 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 NUDT5Q9UKK9 219 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 ZMYM2Q9UBW7 1377 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 TUBAL3A6NHL2 446 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 FADS1O60427 444 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 TBXAS1P24557 533 aaPredicted RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 DIO1P49895 249 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 BMXP51813 675 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC7A2P52569 658 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 RPS3AP61247 264 aaKnown RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNHIT3Q15649 155 aaPredicted RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 MSANTD1Q6ZTZ1 278 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 DHFR2Q86XF0 187 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 C1orf52Q8N6N3 182 aaKnown RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 PIWIL2Q8TC59 973 aaKnown RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 FBXO25Q8TCJ0 367 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 DCPSQ96C86 337 aaKnown RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 AMNQ9BXJ7 453 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC13A1Q9BZW2 595 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 COPS3Q9UNS2 423 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 TCEA3O75764 348 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 SERPINA3P01011 423 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 FMO4P31512 558 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 AVPI1Q5T686 147 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF613Q6PF04 617 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 FAM131AQ6UXB0 335 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 SMG8Q8ND04 991 aaKnown RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 OR1M1Q8NGA1 313 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC7A14Q8TBB6 771 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 TOP1MTQ969P6 601 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 DYNLL2Q96FJ2 89 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF845Q96IR2 970 aaPredicted RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF317Q96PQ6 595 aaPredicted RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 TREX2Q9BQ50 279 aaPredicted RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 MROH8Q9H579 483 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 DCP1AQ9NPI6 582 aaPredicted RBP6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 CAPN6Q9Y6Q1 641 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 EMSYQ7Z589 1322 aa6.74□□□□□ -1.33
PDGFRA-201ENST00000257290 GSG1L2A8MUP6 293 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 hCG_2039718K7EN88 272 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 MDM4O15151 490 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 CHMP24386 653 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ALDH9A1P49189 494 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 TARDBPQ13148 414 aaKnown RBP eCLIP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PTGDRQ13258 359 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ADGRE1Q14246 886 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 FASTKD3Q14CZ7 662 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 SFT2D3Q587I9 215 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ARHGAP11AQ6P4F7 1023 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 HPS6Q86YV9 775 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PPM1NQ8N819 430 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PAPD5Q8NDF8 572 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ENGASEQ8NFI3 743 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC9A7Q96T83 725 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 FAM129BQ96TA1 746 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms