RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 MAPKAPK3Q16644 382 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 PPP2R2DQ66LE6 453 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 ESRP1Q6NXG1 681 aaKnown RBP14.97□□□□□ -0.01
UBE4B-201ENST00000253251 BEND5Q7L4P6 421 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 KRT73Q86Y46 540 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 SLC44A2Q8IWA5 706 aaPredicted RBP14.97□□□□□ -0.01
UBE4B-201ENST00000253251 PCDH20Q8N6Y1 951 aaKnown RBP14.97□□□□□ -0.01
UBE4B-201ENST00000253251 SLC12A4Q9UP95 1085 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 ITM2BQ9Y287 266 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 PCDHGC4Q9Y5F7 938 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 PEX11AO75192 247 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 WDR47O94967 919 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 PIK3R1P27986 724 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 ABRQ12979 859 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 CBX2Q14781 532 aaPredicted RBP14.97□□□□□ -0.01
UBE4B-201ENST00000253251 ANXA8L1Q5VT79 327 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 AP1ARQ63HQ0 302 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 FIG4Q92562 907 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 OTULINQ96BN8 352 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 PRICKLE1Q96MT3 831 aaPredicted RBP14.97□□□□□ -0.01
UBE4B-201ENST00000253251 RHOBTB2Q9BYZ6 727 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 SPAG4Q9NPE6 437 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 TLR9Q9NR96 1032 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 CACNA1SQ13698 1873 aa14.97□□□□□ -0.01
UBE4B-201ENST00000253251 H3BM21 787 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 IQCF3P0C7M6 154 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 NMBRP28336 390 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 CYP4F8P98187 520 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 TMEM63BQ5T3F8 832 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 ZNF621Q6ZSS3 439 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 RGS17Q9UGC6 210 aaPredicted RBP14.96□□□□□ -0.01
UBE4B-201ENST00000253251 FAM220BPB1ANY3 271 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 GOT2P00505 430 aaKnown RBP14.96□□□□□ -0.01
UBE4B-201ENST00000253251 CYP11A1P05108 521 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 CST5P28325 142 aaPredicted RBP14.96□□□□□ -0.01
UBE4B-201ENST00000253251 SERINC3Q13530 473 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 KCNJ11Q14654 390 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 LDLRAP1Q5SW96 308 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 FSTL4Q6MZW2 842 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 HFE2Q6ZVN8 426 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 TMCO5AQ8N6Q1 288 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 TERB1Q8NA31 727 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 N4BP2Q86UW6 1770 aaPredicted RBP14.96□□□□□ -0.01
UBE4B-201ENST00000253251 FAM47E-STBD1D6RA91 191 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 TRIM38O00635 465 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 NPHS1O60500 1241 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 KRT75O95678 551 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 PSME3P61289 254 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 RGS1Q08116 209 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 SPIDRQ14159 915 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 ZNF549Q6P9A3 640 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 CNSTQ6PJW8 725 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 CIR1Q86X95 450 aaPredicted RBP14.96□□□□□ -0.01
UBE4B-201ENST00000253251 MRPL48Q96GC5 212 aaKnown RBP14.96□□□□□ -0.01
UBE4B-201ENST00000253251 DNAJC1Q96KC8 554 aaKnown RBP14.96□□□□□ -0.01
UBE4B-201ENST00000253251 GPR21Q99679 349 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 C6orf203Q9P0P8 240 aaPredicted RBP14.96□□□□□ -0.01
UBE4B-201ENST00000253251 FCF1Q9Y324 198 aaKnown RBP14.96□□□□□ -0.01
UBE4B-201ENST00000253251 SNX8Q9Y5X2 465 aa14.96□□□□□ -0.01
UBE4B-201ENST00000253251 TBC1D3DA0A087WVF3 549 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 TBC1D3IA0A087WXS9 549 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 TBC1D3EA0A087X179 549 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 TBC1D3KA0A087X1G2 549 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 PIPSLA2A3N6 862 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 TBC1D3FA6NER0 549 aaPredicted RBP14.96□□□□□ -0.02
UBE4B-201ENST00000253251 TBC1D3LB9A6J9 549 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 PFDN1O60925 122 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 STK16O75716 305 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 FGF18O76093 207 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 C8GP07360 202 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 TBC1D3HP0C7X1 549 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 POM121L1PQ3SYA9 428 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 TBC1D3GQ6DHY5 549 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 TBC1D3CQ6IPX1 549 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 FBXO46Q6PJ61 603 aaPredicted RBP14.96□□□□□ -0.02
UBE4B-201ENST00000253251 RGL4Q8IZJ4 473 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 TBC1D3Q8IZP1 549 aaPredicted RBP14.96□□□□□ -0.02
UBE4B-201ENST00000253251 ITFG1Q8TB96 612 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 NELL1Q92832 810 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 PTCD3Q96EY7 689 aaKnown RBP14.96□□□□□ -0.02
UBE4B-201ENST00000253251 TSGA13Q96PP4 275 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 RAD9AQ99638 391 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 DZANK1Q9NVP4 752 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.96□□□□□ -0.02
UBE4B-201ENST00000253251 ZMYND8Q9ULU4 1186 aaPredicted RBP14.96□□□□□ -0.02
UBE4B-201ENST00000253251 AP4S1Q9Y587 144 aa14.96□□□□□ -0.02
UBE4B-201ENST00000253251 A0A1W2PRU2 124 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 LRRC72A6NJI9 287 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 AMD1P17707 334 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 IDSP22304 550 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 CSKP41240 450 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 IRX1P78414 480 aaPredicted RBP14.95□□□□□ -0.02
UBE4B-201ENST00000253251 LAPTM5Q13571 262 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 PDGFRLQ15198 375 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 TMEM26Q6ZUK4 368 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 CDK20Q8IZL9 346 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 OR6Y1Q8NGX8 325 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 CCSER2Q9H7U1 834 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 SLCO1B3Q9NPD5 702 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 INTS7Q9NVH2 962 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms