RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 NR0B2Q15466 257 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 LVRNQ6Q4G3 990 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 PEX26Q7Z412 305 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 NLRP8Q86W28 1048 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 NRSN1Q8IZ57 195 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 ZNF567Q8N184 647 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 ACTL9Q8TC94 416 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 HTR3CQ8WXA8 447 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 ZCCHC14Q8WYQ9 949 aaKnown RBP22.88■■□□□ 1.25
LSM4-201ENST00000252816 EID2BQ96D98 161 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 WDR24Q96S15 920 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 RIOK2Q9BVS4 552 aaKnown RBP22.88■■□□□ 1.25
LSM4-201ENST00000252816 TMEM168Q9H0V1 697 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 NCKIPSDQ9NZQ3 722 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 MOSPD1Q9UJG1 213 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 PACSIN2Q9UNF0 486 aaPredicted RBP22.88■■□□□ 1.25
LSM4-201ENST00000252816 DOLKQ9UPQ8 538 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 CACNA1BQ00975 2339 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 EME2A4GXA9 379 aaPredicted RBP22.87■■□□□ 1.25
LSM4-201ENST00000252816 TRABD2BA6NFA1 517 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 OPA1O60313 960 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 FTCDO95954 541 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 GP1BAP07359 652 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 POLD2P49005 469 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 SPINT3P49223 89 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 GSDMDP57764 484 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 OTUD4Q01804 1114 aaKnown RBP22.87■■□□□ 1.25
LSM4-201ENST00000252816 TARDBPQ13148 414 aaKnown RBP eCLIP22.87■■□□□ 1.25
LSM4-201ENST00000252816 XRCC4Q13426 336 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 CCDC181Q5TID7 509 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 ADAMTSL4Q6UY14 1074 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 EFL1Q7Z2Z2 1120 aaKnown RBP22.87■■□□□ 1.25
LSM4-201ENST00000252816 LYSMD3Q7Z3D4 306 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 GKN2Q86XP6 184 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 TXLNBQ8N3L3 684 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 SDR16C5Q8N3Y7 309 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 CCL4L1Q8NHW4 92 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 EVA1BQ9NVM1 165 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 KLHL8Q9P2G9 620 aaPredicted RBP22.87■■□□□ 1.25
LSM4-201ENST00000252816 ZMIZ1Q9ULJ6 1067 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 ADGRG1Q9Y653 693 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 CAPN6Q9Y6Q1 641 aa22.87■■□□□ 1.25
LSM4-201ENST00000252816 F5H423 210 aaPredicted RBP22.86■■□□□ 1.25
LSM4-201ENST00000252816 H7C0C1 242 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 RBL1P28749 1068 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 ATP5OP48047 213 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 KDELC1Q6UW63 502 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 TRIM74Q86UV6 250 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 RAVER1Q8IY67 606 aaKnown RBP22.86■■□□□ 1.25
LSM4-201ENST00000252816 SYCE1Q8N0S2 351 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 KYQ8NBH2 561 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 SCG3Q8WXD2 468 aaKnown RBP22.86■■□□□ 1.25
LSM4-201ENST00000252816 VAT1Q99536 393 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 FAM118BQ9BPY3 351 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 SUDS3Q9H7L9 328 aaPredicted RBP22.86■■□□□ 1.25
LSM4-201ENST00000252816 CARS2Q9HA77 564 aaKnown RBP22.86■■□□□ 1.25
LSM4-201ENST00000252816 SIRPGQ9P1W8 387 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 GULP1Q9UBP9 304 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 FAM153AQ9UHL3 310 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 GPR34Q9UPC5 381 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 SHOC2Q9UQ13 582 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 SLC17A4Q9Y2C5 497 aa22.86■■□□□ 1.25
LSM4-201ENST00000252816 DDX3YO15523 660 aaKnown RBP22.85■■□□□ 1.25
LSM4-201ENST00000252816 NDST3O95803 873 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 WNT3AP56704 352 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 PERM1Q5SV97 790 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 CDCP2Q5VXM1 449 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 PID1Q7Z2X4 250 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 TAF8Q7Z7C8 310 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 ARL10Q8N8L6 244 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 DCBLD1Q8N8Z6 715 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 MDM1Q8TC05 714 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 GLMNQ92990 594 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 OXNAD1Q96HP4 312 aaPredicted RBP22.85■■□□□ 1.25
LSM4-201ENST00000252816 FCRL5Q96RD9 977 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 ZFYVE1Q9HBF4 777 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 MAGEE1Q9HCI5 957 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 PADI4Q9UM07 663 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 SUFUQ9UMX1 484 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 CLCA2Q9UQC9 943 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 TMEM98Q9Y2Y6 226 aa22.85■■□□□ 1.25
LSM4-201ENST00000252816 TAF4O00268 1085 aa22.84■■□□□ 1.25
LSM4-201ENST00000252816 CASC3O15234 703 aaKnown RBP22.84■■□□□ 1.25
LSM4-201ENST00000252816 MT-CO3P00414 261 aa22.84■■□□□ 1.25
LSM4-201ENST00000252816 RPIAP49247 311 aa22.84■■□□□ 1.25
LSM4-201ENST00000252816 HENMT1Q5T8I9 393 aaKnown RBP22.84■■□□□ 1.25
LSM4-201ENST00000252816 DOK6Q6PKX4 331 aa22.84■■□□□ 1.25
LSM4-201ENST00000252816 SFTPA2Q8IWL1 248 aa22.84■■□□□ 1.25
LSM4-201ENST00000252816 CACTIN-AS1Q8N1I8 211 aa22.84■■□□□ 1.25
LSM4-201ENST00000252816 PDCD7Q8N8D1 485 aaKnown RBP22.84■■□□□ 1.25
LSM4-201ENST00000252816 MAPK15Q8TD08 544 aa22.84■■□□□ 1.25
LSM4-201ENST00000252816 CCHCR1Q8TD31 782 aa22.84■■□□□ 1.25
LSM4-201ENST00000252816 COX14Q96I36 57 aa22.84■■□□□ 1.25
LSM4-201ENST00000252816 HIC2Q96JB3 615 aa22.84■■□□□ 1.25
LSM4-201ENST00000252816 FAM83DQ9H4H8 585 aa22.84■■□□□ 1.25
LSM4-201ENST00000252816 PKD2L2Q9NZM6 624 aa22.84■■□□□ 1.25
LSM4-201ENST00000252816 TRHDEQ9UKU6 1024 aa22.84■■□□□ 1.25
LSM4-201ENST00000252816 CNOT6Q9ULM6 557 aaKnown RBP22.84■■□□□ 1.25
LSM4-201ENST00000252816 ZNF711Q9Y462 761 aa22.84■■□□□ 1.25
LSM4-201ENST00000252816 SPO11Q9Y5K1 396 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms