RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 TXNRD3NBQ6F5E7 133 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 ALG1LQ6GMV1 187 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 HSD11B1LQ7Z5J1 315 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 NIPA2Q8N8Q9 360 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 Q8N9G6 341 aaPredicted RBP10.3□□□□□ -0.76
VPS50-201ENST00000251739 EXD3Q8N9H8 876 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 KIAA1524Q8TCG1 905 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 ZNF653Q96CK0 615 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 SCARF2Q96GP6 870 aaPredicted RBP10.3□□□□□ -0.76
VPS50-201ENST00000251739 CSPG4P5Q96PW8 444 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 BPIFA3Q9BQP9 254 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 ISCUQ9H1K1 167 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 ZWILCHQ9H900 591 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 NOD2Q9HC29 1040 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 PHPT1Q9NRX4 125 aaPredicted RBP10.3□□□□□ -0.76
VPS50-201ENST00000251739 FOXJ2Q9P0K8 574 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 SLC17A4Q9Y2C5 497 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 PPIL1Q9Y3C6 166 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 PCDHGC4Q9Y5F7 938 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 COL12A1Q99715 3063 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 A0A1B0GTH6 734 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 A8MX80 341 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 H3BRJ5 948 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 FZD6O60353 706 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 PGLSO95336 258 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 ITGB2P05107 769 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 IVLP07476 585 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 MYBL1P10243 752 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 WT1P19544 449 aaPredicted RBP10.29□□□□□ -0.76
VPS50-201ENST00000251739 AMPD1P23109 780 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 ETV3P41162 512 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 ARSDP51689 593 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 MAZP56270 477 aaKnown RBP10.29□□□□□ -0.76
VPS50-201ENST00000251739 CDK3Q00526 305 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 SLC25A11Q02978 314 aaKnown RBP10.29□□□□□ -0.76
VPS50-201ENST00000251739 SQSTM1Q13501 440 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 IHHQ14623 411 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 PTPRRQ15256 657 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 SMTNL2Q2TAL5 461 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 BOLA3Q53S33 107 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 CCDC183Q5T5S1 534 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 HGSNATQ68CP4 663 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 TMCO3Q6UWJ1 677 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 ZNF574Q6ZN55 896 aaPredicted RBP10.29□□□□□ -0.76
VPS50-201ENST00000251739 Q6ZVL8 140 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 TECPR1Q7Z6L1 1165 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 TSPAN33Q86UF1 283 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 JAMLQ86YT9 394 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 FAM71BQ8TC56 605 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 TEKT4Q8WW24 435 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 PATE1Q8WXA2 126 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 SGF29Q96ES7 293 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 TRIM11Q96F44 468 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 SCRN2Q96FV2 425 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 CMKLR1Q99788 373 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 NUDT22Q9BRQ3 303 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 GSDMCQ9BYG8 508 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 SEMA6CQ9H3T2 930 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 DPEP2Q9H4A9 486 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 CARS2Q9HA77 564 aaKnown RBP10.29□□□□□ -0.76
VPS50-201ENST00000251739 RDH14Q9HBH5 336 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 PCDH18Q9HCL0 1135 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.29□□□□□ -0.76
VPS50-201ENST00000251739 TAAR2Q9P1P5 351 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 MAP4K5Q9Y4K4 846 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 DOPEY2Q9Y3R5 2298 aa10.29□□□□□ -0.76
VPS50-201ENST00000251739 USP9XQ93008 2570 aaPredicted RBP10.29□□□□□ -0.76
VPS50-201ENST00000251739 ZNF106Q9H2Y7 1883 aaKnown RBP10.29□□□□□ -0.76
VPS50-201ENST00000251739 SPTAN1Q13813 2472 aaKnown RBP10.28□□□□□ -0.76
VPS50-201ENST00000251739 HGSO14964 777 aaPredicted RBP10.28□□□□□ -0.76
VPS50-201ENST00000251739 MBD3O95983 291 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 RARAP10276 462 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 AK4P27144 223 aaPredicted RBP10.28□□□□□ -0.76
VPS50-201ENST00000251739 CD82P27701 267 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 CD1CP29017 333 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 CSF2RBP32927 897 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 ARL4AP40617 200 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 MMP13P45452 471 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 GPR3P46089 330 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 CDH6P55285 790 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 OR1D5P58170 312 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 CTBSQ01459 385 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 KLHL30Q0D2K2 578 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 ILF3Q12906 894 aaKnown RBP eCLIP10.28□□□□□ -0.76
VPS50-201ENST00000251739 ARHGEF7Q14155 803 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 ANO6Q4KMQ2 910 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 FIGNQ5HY92 759 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 XKR5Q6UX68 686 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 ADAMTSL4Q6UY14 1074 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 ZNF765Q7L2R6 523 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 ZFAND4Q86XD8 727 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 NAGSQ8N159 534 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 ATPAF2Q8N5M1 289 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 TEX26Q8N6G2 289 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 ZDHHC1Q8WTX9 485 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 PIH1D2Q8WWB5 315 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 USP7Q93009 1102 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 PMEPA1Q969W9 287 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 GBP4Q96PP9 640 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 MRPL47Q9HD33 250 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms