RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 OASLQ15646 514 aaKnown RBP11.27□□□□□ -0.61
SF3B6-201ENST00000233468 WSCD2Q2TBF2 565 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 HS1BP3Q53T59 392 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 CRTC1Q6UUV9 634 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 ZNF765Q7L2R6 523 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 KDELC2Q7Z4H8 507 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 LINC00523Q86TU6 105 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 PARGQ86W56 976 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 RASGEF1CQ8N431 466 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 PNPLA1Q8N8W4 532 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 TP53I13Q8NBR0 393 aaPredicted RBP11.27□□□□□ -0.61
SF3B6-201ENST00000233468 IPMKQ8NFU5 416 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 CCDC110Q8TBZ0 833 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 ACTRT1Q8TDG2 376 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 BTN2A2Q8WVV5 523 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 ATG4AQ8WYN0 398 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 DTD2Q96FN9 168 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 BMFQ96LC9 184 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 COQ10AQ96MF6 247 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 TRIB3Q96RU7 358 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 OSBPL9Q96SU4 736 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 NAPGQ99747 312 aaPredicted RBP11.27□□□□□ -0.61
SF3B6-201ENST00000233468 GPR63Q9BZJ6 419 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 C10orf88Q9H8K7 445 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 LRRC40Q9H9A6 602 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 ZFYVE1Q9HBF4 777 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 TM7SF3Q9NS93 570 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 UBP1Q9NZI7 540 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 PAK5Q9P286 719 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 COQ6Q9Y2Z9 468 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 MSRB2Q9Y3D2 182 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 NEUROG3Q9Y4Z2 214 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 FASNP49327 2511 aaKnown RBP11.27□□□□□ -0.61
SF3B6-201ENST00000233468 GOLGA4Q13439 2230 aaKnown RBP11.26□□□□□ -0.61
SF3B6-201ENST00000233468 SPTY2D1-AS1A0A0U1RR47 76 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 A0A1B0GTQ1 180 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 POM121BA6NF01 834 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 USP27XA6NNY8 438 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 E7EVH7 732 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 RAD51BO15315 384 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 PCDHGA12O60330 932 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 PPFIA2O75334 1257 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 CAPNS1P04632 268 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 PCCBP05166 539 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 PSMB4P28070 264 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 TEAD1P28347 426 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 ETV3P41162 512 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 LMAN1P49257 510 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 STC1P52823 247 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 HNRNPKP61978 463 aaKnown RBP eCLIP11.26□□□□□ -0.61
SF3B6-201ENST00000233468 PDE1BQ01064 536 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 SEMG2Q02383 582 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 PTSQ03393 145 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 DPTQ07507 201 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 SNX1Q13596 522 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 PDE1CQ14123 709 aaPredicted RBP11.26□□□□□ -0.61
SF3B6-201ENST00000233468 INPP5AQ14642 412 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 IRF4Q15306 451 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 SLC1A5Q15758 541 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 ESRP1Q6NXG1 681 aaKnown RBP11.26□□□□□ -0.61
SF3B6-201ENST00000233468 KDELC1Q6UW63 502 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 CBARPQ8N350 705 aaPredicted RBP11.26□□□□□ -0.61
SF3B6-201ENST00000233468 OR13H1Q8NG92 308 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 GRK7Q8WTQ7 553 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 AP2M1Q96CW1 435 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 OXNAD1Q96HP4 312 aaPredicted RBP11.26□□□□□ -0.61
SF3B6-201ENST00000233468 MRGPRX2Q96LB1 330 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 WDR26Q9H7D7 661 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 PHPT1Q9NRX4 125 aaPredicted RBP11.26□□□□□ -0.61
SF3B6-201ENST00000233468 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.26□□□□□ -0.618e-8■□□□□ 8.1
SF3B6-201ENST00000233468 RNF14Q9UBS8 474 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 CA5BQ9Y2D0 317 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 SAR1BQ9Y6B6 198 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 SLCO1B1Q9Y6L6 691 aa11.26□□□□□ -0.61
SF3B6-201ENST00000233468 TP53BP1Q12888 1972 aaPredicted RBP11.26□□□□□ -0.61
SF3B6-201ENST00000233468 TMEM8BA6NDV4 472 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 NEMP2A6NFY4 417 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 C2orf81A6NN90 581 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 H0Y8X5 98 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 AP3B1O00203 1094 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 FLRT2O43155 660 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 CLDN7O95471 211 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 LHCGRP22888 699 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 IGFALSP35858 605 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 PAFAH1B1P43034 410 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 GPR1P46091 355 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 BNC1Q01954 994 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 LAMB3Q13751 1172 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 IHHQ14623 411 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 NFATC4Q14934 902 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 SIRPB2Q5JXA9 342 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 PAPD7Q5XG87 772 aaKnown RBP11.25□□□□□ -0.61
SF3B6-201ENST00000233468 RAET1GQ6H3X3 334 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 PNCKQ6P2M8 343 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 LAYNQ6UX15 382 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 MACC1Q6ZN28 852 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 Q6ZVL8 140 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 HSD11B1LQ7Z5J1 315 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 TECPR1Q7Z6L1 1165 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 RAB44Q7Z6P3 723 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms