RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 TRNAU1APQ9NX07 287 aaKnown RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 CIDEBQ9UHD4 219 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 RPTORQ8N122 1335 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 CCDC189A1A4V9 331 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 MDM4O15151 490 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 TPSB2P20231 275 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 STAT5AP42229 794 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 GRM3Q14832 879 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 TPSAB1Q15661 275 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 KHDC1Q4VXA5 237 aaKnown RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 POTEHQ6S545 545 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 R3HCC1LQ7Z5L2 792 aaKnown RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 TBC1D21Q8IYX1 336 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 CCDC185Q8N715 623 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 ZNF781Q8N8C0 355 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 MKL2Q9ULH7 1088 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 NCKAP1Q9Y2A7 1128 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 RIMS1Q86UR5 1692 aaKnown RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 CCL22O00626 93 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 HAT1O14929 419 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 LRCH4O75427 683 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 CREB1P16220 341 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 CCNHP51946 323 aaPredicted RBP13.35□□□□□ -0.27
NEK4-201ENST00000233027 TAS2R41P59536 307 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 ABATP80404 500 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 NOMO2Q5JPE7 1267 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 SLC25A24Q6NUK1 477 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 CRTC3Q6UUV7 619 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 SPATA19Q7Z5L4 167 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 SATL1Q86VE3 508 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 SIX5Q8N196 739 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 ZFP28Q8NHY6 868 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 MCFD2Q8NI22 146 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 NAT14Q8WUY8 206 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 ACAT2Q9BWD1 397 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 EURLQ9NYK6 297 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 LYNP07948 512 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 TLX1P31314 330 aaPredicted RBP13.35□□□□□ -0.27
NEK4-201ENST00000233027 ZYG11AQ6WRX3 759 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 FAM156AQ8NDB6 213 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 OSBPL7Q9BZF2 842 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 KPNA5O15131 536 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 XYLBO75191 536 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 LRIG2O94898 1065 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 C9P02748 559 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 FGF1P05230 155 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 SEPHS1P49903 392 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 PPCDCQ96CD2 204 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 C7orf26Q96N11 449 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 SGK2Q9HBY8 427 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 CNOT6Q9ULM6 557 aaKnown RBP13.35□□□□□ -0.27
NEK4-201ENST00000233027 NT5C1B-RDH14C9J2C7 533 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 TRAFD1O14545 582 aaPredicted RBP13.35□□□□□ -0.27
NEK4-201ENST00000233027 NCK1P16333 377 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 CXCR2P25025 360 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 ZNHIT3Q15649 155 aaPredicted RBP13.35□□□□□ -0.27
NEK4-201ENST00000233027 SLC9A7Q96T83 725 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 SPATA5L1Q9BVQ7 753 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 WDR12Q9GZL7 423 aaKnown RBP13.35□□□□□ -0.27
NEK4-201ENST00000233027 ABCB9Q9NP78 766 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 WBP11Q9Y2W2 641 aaKnown RBP13.35□□□□□ -0.27
NEK4-201ENST00000233027 SNX10Q9Y5X0 201 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 OR10H2O60403 315 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 OR4Q2P0C623 313 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 IDH3AP50213 366 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 RABGGTBP53611 331 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 NAA20P61599 178 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 TARBP2Q15633 366 aaKnown RBP13.35□□□□□ -0.27
NEK4-201ENST00000233027 TEX44Q53QW1 395 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 TREML2Q5T2D2 321 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 CWF19L1Q69YN2 538 aaKnown RBP13.35□□□□□ -0.27
NEK4-201ENST00000233027 GALNT18Q6P9A2 607 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 RAB26Q9ULW5 256 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 NR2E1Q9Y466 385 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 TMEM131LA2VDJ0 1609 aa13.35□□□□□ -0.27
NEK4-201ENST00000233027 UGT2B11O75310 529 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 PRKAR1AP10644 381 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 ICAM3P32942 547 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 CTSKP43235 329 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 MTTPP55157 894 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 EGFLAMQ63HQ2 1017 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 CHPFQ8IZ52 775 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 LRRC17Q8N6Y2 441 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 SOHLH2Q9NX45 425 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 BCKDKO14874 412 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 RPP40O75818 363 aaKnown RBP13.34□□□□□ -0.27
NEK4-201ENST00000233027 OR5F1O95221 314 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 CCNE2O96020 404 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 IGFBP5P24593 272 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 AQP4P55087 323 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 LGALS3BPQ08380 585 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 ARL13AQ5H913 290 aaPredicted RBP13.34□□□□□ -0.27
NEK4-201ENST00000233027 ANXA8L1Q5VT79 327 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 PAOXQ6QHF9 649 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 TOP6BLQ8N6T0 577 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 OR4K2Q8NGD2 314 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 CADM1Q9BY67 442 aaKnown RBP13.34□□□□□ -0.27
NEK4-201ENST00000233027 DHX15O43143 795 aaKnown RBP13.34□□□□□ -0.27
NEK4-201ENST00000233027 PABPC1LQ4VXU2 614 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms