RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 MYLK3Q32MK0 819 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 ASTLQ6HA08 431 aaPredicted RBP14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 C22orf39Q6P5X5 142 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 CERS6Q6ZMG9 384 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 TRIM67Q6ZTA4 783 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 LYSMD3Q7Z3D4 306 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 PIM3Q86V86 326 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 PIANPQ8IYJ0 282 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 STK40Q8N2I9 435 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 CBARPQ8N350 705 aaPredicted RBP14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 KIF2BQ8N4N8 673 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 EID2BQ96D98 161 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 RILPQ96NA2 401 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 BIRC8Q96P09 236 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 CCDC106Q9BWC9 280 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 GPR63Q9BZJ6 419 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 TFB2MQ9H5Q4 396 aaKnown RBP14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 KLC4Q9NSK0 619 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 TAS2R13Q9NYV9 303 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 SLC25A13Q9UJS0 675 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 HCFC2Q9Y5Z7 792 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 A0A1W2PQ67 120 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 A8MT66 165 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 NEDD8-MDP1E9PL57 170 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 HDAC3O15379 428 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 SRP72O76094 671 aaKnown RBP14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 CSPG5O95196 566 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 CHRNGP07510 517 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 PRSS56P0CW18 603 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 PKMP14618 531 aaKnown RBP14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 TFEBP19484 476 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 AOC1P19801 751 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 PTGER3P43115 390 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 CTSOP43234 321 aaPredicted RBP14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 VASPP50552 380 aaPredicted RBP14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 NTHL1P78549 312 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 SETMARQ53H47 684 aaPredicted RBP14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 PSAPL1Q6NUJ1 521 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 GRASPQ7Z6J2 395 aaPredicted RBP14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 PACS2Q86VP3 889 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 ADGRG2Q8IZP9 1017 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 KIRREL3Q8IZU9 778 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 L3HYPDHQ96EM0 354 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 ZSWIM3Q96MP5 696 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 ZNF641Q96N77 438 aaPredicted RBP14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 TRMOQ9BU70 441 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 HTATIP2Q9BUP3 242 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 DERL2Q9GZP9 239 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 CCDC68Q9H2F9 335 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 POMKQ9H5K3 350 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 COG4Q9H9E3 785 aa14.27□□□□□ -0.13
RTFDC1-201ENST00000023939 RHOBTB1O94844 696 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 POP4O95707 220 aaKnown RBP14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 SLC4A1P02730 911 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 ESR1P03372 595 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 PYGLP06737 847 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 KRT16P08779 473 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 TYRP14679 529 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 ATP6V0D1P61421 351 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 PDAP1Q13442 181 aaKnown RBP14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 GPM6BQ13491 265 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 CARD16Q5EG05 197 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 ADIPOR2Q86V24 386 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 OR6K2Q8NGY2 324 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 KCNJ9Q92806 393 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 TNKS2Q9H2K2 1166 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 LINC00597Q9H2U6 94 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 ZFYVE1Q9HBF4 777 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 FBXO10Q9UK96 956 aa14.26□□□□□ -0.13
RTFDC1-201ENST00000023939 UBA6A0AVT1 1052 aaPredicted RBP14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 WASH3PC4AMC7 463 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 GRID2O43424 1007 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 ZBTB14O43829 449 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 VPS26AO75436 327 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 CA3P07451 260 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 ALPIP09923 528 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 ESRRAP11474 423 aaPredicted RBP14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 CEBPBP17676 345 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 CTPS1P17812 591 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 IMPDH1P20839 514 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 KCNA5P22460 613 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 RPS3P23396 243 aaKnown RBP eCLIP14.25□□□□□ -0.132e-6■□□□□ 9.8
RTFDC1-201ENST00000023939 MPSTP25325 297 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 FMO4P31512 558 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 HNF1BP35680 557 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 STK19P49842 368 aaPredicted RBP14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 CDKN1CP49918 316 aaPredicted RBP14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 ECT2LQ008S8 904 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 PTPRRQ15256 657 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 PTPRNQ16849 979 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 ZRANB3Q5FWF4 1079 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 CFAP157Q5JU67 520 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 LY6G5CQ5SRR4 150 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 SEL1L3Q68CR1 1132 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 TREML1Q86YW5 311 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 NKAPQ8N5F7 415 aaKnown RBP14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 CELF5Q8N6W0 485 aaKnown RBP14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 KDM1BQ8NB78 822 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 UTP4Q969X6 686 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms