RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 SBF1O95248 1867 aa10.51□□□□□ -0.73
CX3CL1-201ENST00000006053 PAPPA2Q9BXP8 1791 aa10.51□□□□□ -0.73
CX3CL1-201ENST00000006053 SCN4AP35499 1836 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 MEIS3P2A8K0S8 358 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 H3BMM5 538 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 MATN3O15232 486 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 MSI1O43347 362 aaKnown RBP10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 NOL3O60936 208 aaKnown RBP10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 HGFP14210 728 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 SMPD1P17405 629 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 BDNFP23560 247 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 C21orf59P57076 290 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 ATP6V0D1P61421 351 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 ATP1A4Q13733 1029 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 PFKFB4Q16877 469 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 ZIK1Q3SY52 487 aaPredicted RBP10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 RABL3Q5HYI8 236 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 OTUD3Q5T2D3 398 aaPredicted RBP10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 FAAH2Q6GMR7 532 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 RANBP10Q6VN20 620 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 ADGRG5Q8IZF4 528 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 PACRGLQ8N7B6 248 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 TWIST2Q8WVJ9 160 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 VPS33AQ96AX1 596 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 NSUN5Q96P11 429 aaKnown RBP10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 IL12RB2Q99665 862 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 PRKD2Q9BZL6 878 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 VTA1Q9NP79 307 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 J3QRK9 145 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 GABRDO14764 452 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 BAIAP3O94812 1187 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 ZBTB11O95625 1053 aaPredicted RBP10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 SNAP29O95721 258 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 UGT1A1P22309 533 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 UGT1A4P22310 534 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 SLC6A2P23975 617 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 UGT1A3P35503 534 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 UGT1A5P35504 534 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 TRAF2Q12933 501 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 NFYCQ13952 458 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 SNX17Q15036 470 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 ATP6AP1Q15904 470 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 UBXN11Q5T124 520 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 ISCA2Q86U28 154 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 PEX5LQ8IYB4 626 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 PTCD2Q8WV60 388 aaKnown RBP10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 PTERQ96BW5 349 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 FBXL8Q96CD0 374 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 LRRC58Q96CX6 371 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 GPATCH1Q9BRR8 931 aaKnown RBP10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 NT5MQ9NPB1 228 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 ATAD3AQ9NVI7 634 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 GID8Q9NWU2 228 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 ZNHIT2Q9UHR6 403 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 BBIP1A8MTZ0 92 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 UBXN8O00124 270 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 PTGESO14684 152 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 PAGE1O75459 146 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 CRCPO75575 148 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 CDK14O94921 469 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 SMIM10L2AP0DMW4 78 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 SMIM10L2BP0DMW5 78 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 MAP4P27816 1152 aaKnown RBP10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 LEPRP48357 1165 aaKnown RBP10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 CCT8P50990 548 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 ARSDP51689 593 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 ECT2LQ008S8 904 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 PAN2Q504Q3 1202 aaKnown RBP10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 TMTC4Q5T4D3 741 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 KIAA0408Q6ZU52 694 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 DDHD1Q8NEL9 900 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 TRPV3Q8NET8 790 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 UBXN10Q96LJ8 280 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 TRMOQ9BU70 441 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 RGS18Q9NS28 235 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 TBCCD1Q9NVR7 557 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 PKD2L2Q9NZM6 624 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 HACD3Q9P035 362 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 ACTR3BQ9P1U1 418 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 MARCH4Q9P2E8 410 aaPredicted RBP10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 KCTD3Q9Y597 815 aa10.5□□□□□ -0.73
CX3CL1-201ENST00000006053 FXYD1O00168 92 aa10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 CXCL11O14625 94 aa10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 AZIN1O14977 448 aa10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 DYNC1LI2O43237 492 aaPredicted RBP10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 B4GAT1O43505 415 aa10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 SERPINB7O75635 380 aa10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 GFAPP14136 432 aa10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 ZNF182P17025 639 aaPredicted RBP10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 CAPGP40121 348 aa10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 CD86P42081 329 aa10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 SERPINH1P50454 418 aaKnown RBP10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 AFF1P51825 1210 aaKnown RBP10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 DIO3P55073 304 aa10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 RELAQ04206 551 aa10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 BNIP2Q12982 314 aa10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 UGT3A2Q3SY77 523 aa10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 PRMT9Q6P2P2 845 aa10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 SCIMPQ6UWF3 145 aa10.49□□□□□ -0.73
CX3CL1-201ENST00000006053 BHLHA9Q7RTU4 235 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms