RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 RlfA2A7F4 1918 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Numa1E9Q7G0 2094 aaKnown RBP13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Ttc23lA6H6E9 458 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Vmn2r24D3YUI0 854 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 SelenovD3YXG1 328 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Vmn2r85G3UW56 850 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Rhox2gL7MUB9 191 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Adcy1O88444 1118 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Pde8aO88502 823 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 F3P20352 294 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 CremP27699 357 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 HmgclP38060 325 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Rpl26P61255 145 aaKnown RBP13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Cd300lgQ1ERP8 331 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Ceacam5Q3UKK2 947 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Map3k7Q62073 579 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 PtprrQ62132 656 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Ddx42Q810A7 929 aaKnown RBP13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Timm29Q8BGX2 266 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Cers6Q8C172 384 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Cfap61Q8CEL2 1252 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Mab21L3Q8CI17 429 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Ints10Q8K2A7 710 aaKnown RBP13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Slc6a20aQ8VDB9 592 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Olfr1325Q8VF43 315 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 AjubaQ91XC0 547 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Pcdhgb1Q91XX8 918 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Pcdhb18Q91Y02 792 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Nudt14Q9D142 222 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 AcadsbQ9DBL1 432 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Gpc1Q9QZF2 557 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Pcm1Q9R0L6 2025 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Ak1Q9R0Y5 194 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Dlc1Q9R0Z9 1092 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Dio2Q9Z1Y9 266 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 PtprdQ64487 1912 aa13.32□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Umodl1Q5DID3 1319 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Mcf2A2AEU1 1111 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Vmn2r115E9Q0E7 857 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Vmn2r111K7N674 857 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Rundc3aO08576 446 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Chil3O35744 398 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 TertO70372 1122 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Stx7O70439 261 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Btg4O70552 250 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 P01664 111 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 PfklP12382 780 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Il6raP22272 460 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 CcnfP51944 777 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Polr3bP59470 1133 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Ap1s1P61967 158 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Ldb1P70662 411 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Arf5P84084 180 aaKnown RBP13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 NxnP97346 435 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Micall2Q3TN34 1009 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Zfp217Q3U0X6 1041 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 HexdcQ3U4H6 486 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Xkr5Q5GH66 676 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 ManealQ6P1J0 452 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 HadhaQ8BMS1 763 aaKnown RBP13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Itpk1Q8BYN3 419 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Tmc7Q8C428 726 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Q8C5S3 137 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Gsg1Q8R1W2 324 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Vmn1r18Q8R2C8 299 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Adgrf1Q8VEC3 908 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Olfr1353Q8VGU8 309 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Golm1Q91XA2 393 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Slc44a3Q921V7 656 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Krt5Q922U2 580 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 MydgfQ9CPT4 166 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Marc1Q9CW42 340 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 SarnpQ9D1J3 210 aaKnown RBP13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Bpifa3Q9D9J8 232 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 DcpsQ9DAR7 338 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Ing2Q9ESK4 281 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Jam2Q9JI59 298 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Copg1Q9QZE5 874 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Fiz1Q9WTJ4 500 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Fhl5Q9WTX7 284 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Gbp2Q9Z0E6 589 aa13.31□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 6720489N17RikA0A1Y7VJW0 127 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Gm21731A0A286YDE9 180 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Btnl4A2CG29 586 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Tmem45a2B7ZWJ5 289 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Slc4a5E9Q3M5 1116 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Vmn1r176G3UW31 304 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Hmgxb3G3X9M3 1254 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 CflarO35732 481 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 MaffO54791 156 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Cyp2b19O55071 492 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Cd160O88875 185 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Ets2P15037 468 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Hcls1P49710 486 aaKnown RBP13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 SmoP56726 793 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Mdga1Q0PMG2 940 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Pag1Q3U1F9 429 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Prss36Q5K2P8 849 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Nfe2l1Q61985 741 aa13.3□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 VwdeQ6DFV8 926 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms