RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Thap1Q8CHW1 210 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Aimp2Q8R010 320 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Tktl2Q9D4D4 627 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 A0A286YDM2 672 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm7929A0A286YDV3 213 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm21977F6U3N7 213 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm8247F6VRJ8 213 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm8005F6YKY3 213 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm3015F6ZAP6 213 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm8212F6ZMY5 213 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm7954F7BAX1 213 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm8138F7BY56 213 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm8232F7CFJ3 213 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm17079F7D8Y4 213 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm8094K7N6U8 211 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm8165L7N218 213 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm8122L7N2C7 213 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm17078M0QW51 211 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Irf1P15314 329 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Slfn4Q3UV66 602 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Spata13Q5DU57 656 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 FicdQ8BIX9 458 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 CrtapQ9CYD3 400 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Slc7a5Q9Z127 512 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Mia3Q8BI84 1930 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Ms4a5Q810P8 197 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Cdh7Q8BM92 785 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Cep68Q8C0D9 733 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Sult1c2Q9D939 296 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Ppp1r3fQ9JIG4 799 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Kctd17E0CYQ0 296 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Slc28a1E9PXX9 648 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 IapP03975 557 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Hp1bp3Q3TEA8 554 aaKnown RBP18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gcnt3Q5JCT0 437 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Lgi2Q8K4Z0 550 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Slco1a5Q91YY5 670 aa18.38■□□□□ 0.53
Trim71-201ENSMUST00000111816 Nmt2O70311 529 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 AxlQ00993 888 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Nle1Q8VEJ4 485 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Pon1P52430 355 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Serpinf1P97298 417 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Spink5Q148R4 1017 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Olfr1052Q8VGR8 312 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 1700129C05RikQ9CQ77 218 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 ProdhQ9WU79 599 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Tspan5P62080 268 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Bmp1P98063 991 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Dpy19l3Q71B07 716 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Fnip2Q80TD3 1108 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Large1Q9Z1M7 756 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Elk3P41971 409 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Slc6a4Q60857 630 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Olfr299Q7TS05 330 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Mettl21cQ8BLU2 248 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Sav1Q8VEB2 386 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Mrpl9Q99N94 265 aaKnown RBP18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Cables1Q9ESJ1 568 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 B3gat3P58158 335 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 PmlQ60953 885 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Tmem260Q8BMD6 703 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Il22bQ9JJY8 179 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 SmoktcrA2KF29 484 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Ap2s1P62743 142 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Itga4Q00651 1039 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 IdsQ08890 552 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Snx33Q4VAA7 574 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Pramel1Q99MW3 458 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Usp54Q8BL06 1588 aaKnown RBP18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Htr5bP31387 370 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Il18P70380 192 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Tas2r115Q7M719 310 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Commd1Q8K4M5 188 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Mettl15Q9DCL4 406 aa18.37■□□□□ 0.53
Trim71-201ENSMUST00000111816 Tulp3O88413 460 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Pacs2Q3V3Q7 862 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 VcpkmtQ8C436 228 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Exd1Q8CDF7 570 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Vcpip1Q8CDG3 1220 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Mtmr4Q91XS1 1190 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Slc2a6Q3UDF0 497 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Pim2Q62070 370 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Mib1Q80SY4 1006 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Arl5aQ80ZU0 179 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 P2ry10Q8BFU7 328 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Ssxb1Q9CPU1 170 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Prl8a8Q9DAS4 241 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Ssxb8B1AY40 170 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Mtx3D3YTP3 312 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Rab4aP56371 218 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Inpp5kQ8C5L6 468 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 As3mtQ91WU5 376 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Pcdhga6Q91XY2 932 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Sh3bp4Q921I6 962 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Clp1Q99LI9 425 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 PfkpQ9WUA3 784 aaKnown RBP18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Tnni3kQ5GIG6 834 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Rbm22Q8BHS3 420 aaKnown RBP18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Caskin2Q8VHK1 1201 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Ccdc167Q9D162 97 aa18.36■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms