RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Cox10Q8CFY5 443 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mill2Q8HWE5 355 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cd248Q91V98 765 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 OptcQ920A0 328 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gmpr2Q99L27 348 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ddx50Q99MJ9 734 aaKnown RBP8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Bco2Q99NF1 532 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Rgs10Q9CQE5 181 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Snrpb2Q9CQI7 225 aaKnown RBP8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Tmbim6Q9D2C7 237 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 NosipQ9D6T0 301 aaKnown RBP8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 MecrQ9DCS3 373 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Tnip3A0A1D5RMN0 279 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Mindy4b-psA0A1W2P7H6 457 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Gm5751A2AHC8 147 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Armc4B2RY50 1037 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Gm5861F6VCN9 180 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Gm42421F6X8D5 166 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Vmn2r61L7N2B8 865 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Dnajb5O89114 348 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Bmpr1aP36895 532 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Hspa4lP48722 838 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 NadkP58058 439 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Ctps2P70303 586 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Atp5jP97450 108 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Slc22a23Q3UHH2 689 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Fbxw2Q60584 422 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Sv2cQ69ZS6 727 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Rsbn1Q80T69 795 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Fndc11Q80WB0 326 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 MtbpQ8BJS8 894 aaKnown RBP8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Pggt1bQ8BUY9 377 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Tgif2Q8C0Y1 237 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Robo4Q8C310 1012 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 KyQ8C8H8 661 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Vps39Q8R5L3 886 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 DeraQ91YP3 318 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Mta3Q924K8 591 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 PacrglQ9D3X5 248 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Syvn1Q9DBY1 612 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 LactbQ9EP89 551 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Kat2bQ9JHD1 813 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Htr3bQ9JHJ5 437 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Cyp3a41aQ9JMA7 504 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Cntnap5aQ0V8T9 1304 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Tmem245B1AZA5 876 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Gm6408J3QNG1 320 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Gm3402K7N5P2 326 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Mapk12O08911 367 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Edil3O35474 480 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Myf6P15375 242 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 DckP43346 260 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 TgfbiP82198 683 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Hoxd1Q01822 328 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Ptchd3Q0EEE2 906 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Olfr463Q5SW49 311 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Olfr462Q5SW50 311 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Rnf145Q5SWK7 663 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 GcdhQ60759 438 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Abcg1Q64343 666 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Abcg2Q7TMS5 657 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Carnmt1Q80UY1 400 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Slc41a1Q8BJA2 512 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Gpr150Q8BL07 427 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Peli3Q8BXR6 445 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Tor1aip2Q8BYU6 502 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Ace2Q8R0I0 805 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Fbxw7Q8VBV4 629 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Vps4aQ8VEJ9 437 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Cavin3Q91VJ2 260 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Pcdhb13Q91Y06 796 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Slc35b2Q91ZN5 431 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Psip1Q99JF8 528 aaKnown RBP8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Rwdd4Q9CPR1 188 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Nos1apQ9D3A8 503 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 CrotQ9DC50 612 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 CasrQ9QY96 1079 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 St6galnac4Q9R2B6 360 aa8.27□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Klhl18A0A0G2JGN5 579 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Gm10424A0A0J9YVD0 481 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Gm7971J3QMM8 481 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Adra2bP30545 450 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Clcn3P51791 818 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Erp29P57759 262 aaKnown RBP8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Acot8P58137 320 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Dlx4P70436 240 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Stt3bQ3TDQ1 823 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Dennd1bQ3U1T9 766 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Tex24Q5DP50 351 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Rabl6Q5U3K5 725 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Mtnr1aQ61184 353 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Dnajb13Q80Y75 316 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 ChfrQ810L3 664 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Elmod2Q8BGF6 293 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 4933430I17RikQ8BHW4 495 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Snx17Q8BVL3 470 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Sec22cQ8BXT9 303 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Wdr59Q8C0M0 992 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 BicralQ8CHH5 1074 aa8.26□□□□□ -1.09
Cdc40-201ENSMUST00000044166 Mtg1Q8R2R6 326 aa8.26□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms