RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Cers6Q8C172 384 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Kctd5Q8VC57 234 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Mospd1Q8VEL0 213 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Olfr853Q8VGG6 305 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Asf1aQ9CQE6 204 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Kcne2Q9D808 123 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Rpl38Q9JJI8 70 aaKnown RBP11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Hs6st1Q9QYK5 411 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Coro1bQ9WUM3 484 aaKnown RBP11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Tnfrsf25B1AWN9 411 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ssxb8B1AY40 170 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Sipa1P46062 1037 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ube2e3P52483 207 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Klhdc10Q6PAR0 439 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Scn3bQ8BHK2 215 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Tubgcp5Q8BKN5 1024 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Q8BL95 290 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Adgrg1Q8K209 687 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Pias4Q9JM05 507 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 PigqQ9QYT7 581 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Psma4Q9R1P0 261 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 DnpepQ9Z2W0 473 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Mtx3D3YTP3 312 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 MlipQ5FW52 269 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 GkQ64516 559 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 DcstampQ7TNJ0 470 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 RybpQ8CCI5 228 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Atg10Q8R1P4 215 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Dio2Q9Z1Y9 266 aa11.86□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Phrf1A6H619 1682 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gm14459A2BI73 179 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ssxb6A2BI74 170 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Olfr603L7N1Y4 312 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Sel1l2Q3V172 688 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Brsk1Q5RJI5 778 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Pfkfb4Q6DTY7 469 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Neu4Q8BZL1 478 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Anapc2Q8BZQ7 837 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Sh3kbp1Q8R550 709 aaKnown RBP11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ubqln5Q9D4I8 510 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Cdh13Q9WTR5 714 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Rfc2Q9WUK4 349 aaKnown RBP11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gm45713A0A1B0GS68 446 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Fkbp8O35465 402 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 NmbrO54799 390 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 ClgnP52194 611 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Lemd2Q6DVA0 511 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Wdtc1Q80ZK9 677 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Rhbdl2A2AGA4 302 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Vmn2r115E9Q0E7 857 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Vmn2r14E9Q759 848 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 P01650 108 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 P01653 108 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ddx6P54823 483 aaKnown RBP11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Scn2bQ56A07 215 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 ProcrQ64695 242 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Cypt2Q6P924 180 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Hmgxb4Q80Y32 594 aaKnown RBP11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Vps26bQ8C0E2 336 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gsto2Q8K2Q2 248 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Zbtb44Q8R0A2 453 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Lgals12Q91VD1 314 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ube4bQ9ES00 1173 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ropn1Q9ESG2 212 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Rap1gds1E9Q912 607 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 KapP61110 121 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ap2m1P84091 435 aaKnown RBP11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 DmwdQ08274 665 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gm5800Q497L3 186 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Slc5a10Q5SWY8 596 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Jak2Q62120 1129 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Rxfp4Q7TQP4 414 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Fut11Q8BHC9 489 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 NclnQ8VCM8 563 aaKnown RBP11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Olfr690Q8VH18 315 aa11.85□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gm3854A0A1B0GSS6 495 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gm12800B1AUV4 484 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Vmn2r59E9PUT5 865 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gm20503G3UZK1 150 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gm12794L7MTS5 483 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 P01740 135 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Cxcr2P35343 359 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ptpn5P54830 541 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Cyp2j13Q3UNV4 503 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Fem1cQ8CEF1 617 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Clptm1Q8VBZ3 664 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Sgip1Q8VD37 806 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Clstn3Q99JH7 956 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Cldnd1Q9CQX5 253 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 DlstQ9D2G2 454 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 4930578G10RikQ9D4Q4 153 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Agpat3Q9D517 376 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Q9D979 236 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Tagln3Q9R1Q8 199 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ap4s1Q9WVL1 144 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ttll11A4Q9F4 727 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Upp1P52624 311 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Rbm44Q3V089 1013 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gstt2Q61133 244 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Smarcal1Q8BJL0 910 aa11.84□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms