RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Prickle1Q3U5C7 832 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 AcdQ5EE38 416 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Ckmt2Q6P8J7 419 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Mis18bp1Q80WQ8 998 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Pgs1Q8BHF7 553 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Hspbap1Q8BK58 483 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Fra10ac1Q8BP78 315 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Cfap61Q8CEL2 1252 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Ngly1Q9JI78 651 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Il20Q9JKV9 176 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Gm10722F6VLK5 217 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Hmox2O70252 315 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Sh3pxd2aO89032 1124 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Nat3P50296 290 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Zfp868Q3UTQ6 422 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Ints7Q7TQK1 966 aaKnown RBP13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Mcph1Q7TT79 822 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Ifi44Q8BV66 422 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Galnt13Q8CF93 556 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Zdhhc3Q8R173 299 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Acot13Q9CQR4 140 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Tmed11Q9D2R4 215 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Cntd1Q9D995 334 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Q9DAD0 168 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 CasrQ9QY96 1079 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Hs6st1Q9QYK5 411 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Fbxo8Q9QZN3 319 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Tpk1Q9R0M5 243 aa13.4□□□□□ -0.26
Vps35-201ENSMUST00000034131 Gm43796A0A0J9YV32 372 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 XntrpcF8VQM8 1264 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Slc2a7P0C6A1 513 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Spp1P10923 294 aaKnown RBP13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 BdnfP21237 249 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Cst8P32766 142 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Stfa3P35173 103 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Kcnab3P97382 249 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Scn1bP97952 218 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Pros1Q08761 675 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Snx21Q3UR97 363 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Tbc1d24Q3UUG6 561 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 SctrQ5FWI2 447 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Rnf43Q5NCP0 784 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Spata20Q80YT5 790 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Zfp719Q8BIV1 735 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 GmppbQ8BTZ7 360 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Znf467Q8JZL0 594 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Tbc1d13Q8R3D1 400 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Elf5Q8VDK3 253 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Rem2Q8VEL9 341 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Capn8Q91VA3 703 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 1700034I23RikQ9D9Q3 184 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Tor1bQ9ER41 336 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Tgm7A2ART8 616 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Plekha5E9Q6H8 1269 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Olfr731F8VQB9 326 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Clcn7O70496 803 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 ItgamP05555 1153 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Tcea1P10711 301 aaKnown RBP13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Il1rl1P14719 567 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Ybx1P62960 322 aaKnown RBP13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Gabpb1Q00420 383 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Prkd1Q62101 918 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Plppr4Q7TME0 766 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Prickle2Q80Y24 845 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Slc7a4Q8BLQ7 635 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Zswim3Q8CFL8 695 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Dap3Q9ER88 391 aaKnown RBP13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Gon4lQ9DB00 2260 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Trip11E9Q512 1976 aa13.39□□□□□ -0.27
Vps35-201ENSMUST00000034131 Cylc1A0A1B0GR13 642 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Ccdc163A2AGD7 326 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 HcrtO55241 130 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Gpx3P46412 226 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 PrkcgP63318 697 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Cyp2c65Q148B1 490 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Alg6Q3TAE8 507 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 B3gntl1Q3U129 357 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Dnajc1Q61712 552 aaKnown RBP13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 SynbQ8BI41 618 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Ankrd52Q8BTI7 1076 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Parp9Q8CAS9 866 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Lrrc66Q8K0B3 872 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Hdac11Q91WA3 347 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 WaslQ91YD9 501 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Atg7Q9D906 698 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 ArntlQ9WTL8 632 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Psmb10O35955 273 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Pou4f1P17208 421 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 CtswP56203 371 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Ext2P70428 718 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 AxlQ00993 888 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Dnajb14Q149L6 379 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 BadQ61337 204 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Rapgefl1Q68EF8 662 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Acot5Q6Q2Z6 421 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Fam49aQ8BHZ0 323 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 LdahQ8BVA5 326 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Prmt5Q8CIG8 637 aa13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Nol6Q8R5K4 1152 aaKnown RBP13.38□□□□□ -0.27
Vps35-201ENSMUST00000034131 Olfr570Q8VH12 312 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms