RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Brinp3Q499E0 766 aa10.14□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Olfr533Q7TRT7 320 aa10.14□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Pum1Q80U78 1189 aaKnown RBP10.14□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gxylt2Q810K9 444 aa10.14□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Rcn3Q8BH97 328 aa10.14□□□□□ -0.79
Ubr1-201ENSMUST00000028728 TrhdeQ8K093 1025 aa10.14□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Zfp940Q8R2Q3 566 aa10.14□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Setd7Q8VHL1 366 aa10.14□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Chst7Q9EP78 484 aa10.14□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Olfr704Q9EPF6 315 aa10.14□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Igdcc4Q9EQS9 1252 aa10.14□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Klhl33G3UW92 533 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Sult3a2G5E904 293 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 NapsaO09043 419 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Pias1O88907 651 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Slc2a3P32037 493 aaKnown RBP10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 S100a1P56565 94 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cdh9P70407 786 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Zmym5Q3U2E2 627 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Thap1Q8CHW1 210 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Phf10Q9D8M7 497 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Zfp985A2A7A5 519 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm21973F6WEZ7 68 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Prl6a1O35257 230 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gsta1P13745 223 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Pcbp1P60335 356 aaKnown RBP10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fcho2Q3UQN2 809 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Znf219Q6IQX8 726 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gsta1Q6P8Q0 223 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Lrrc75bQ7TPD7 306 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Nmur2Q8BZ39 395 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Olfr170Q8VGL6 313 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Haus5Q9D786 619 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ddi2A2ADY9 399 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm2956E9PVJ0 216 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm5796E9Q7M8 205 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm3629K7N6Y2 205 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm10340K7N708 205 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm8108K7N734 216 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Mknk1O08605 427 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Sdc4O35988 198 aaKnown RBP10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 AurkcO88445 282 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Hcn3O88705 779 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Phkg1P07934 388 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Atp5jP97450 108 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Thnsl2Q80W22 483 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Zdhhc15Q8BGJ0 337 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Creb3l2Q8BH52 521 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Vps26bQ8C0E2 336 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Med11Q9D8C6 117 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Slc28a3Q9ERH8 703 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tinf2Q9QXG9 341 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ubqln2Q9QZM0 638 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ttll6A4Q9E8 822 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Zfp277E9Q6D6 583 aaKnown RBP10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Msl3l2G3X992 371 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gosr2O35166 212 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fgfr2P21803 821 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Pax3P24610 479 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Epb42P49222 691 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Irf3P70671 419 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ncf4P97369 339 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Pydc3Q3V3Q4 588 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ccdc85aQ5SP85 500 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ca4Q64444 305 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gabra5Q8BHJ7 463 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ubxn2aQ99KJ0 258 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Slc26a5Q99NH7 744 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Sppl3Q9CUS9 384 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Q9D2Q3 444 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cyb561d2Q9WUE3 222 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Syndig1A2ANU3 258 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm6337K7N6X9 211 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm3115L7N285 211 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ctbp1O88712 441 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Stx4P70452 298 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ei24Q61070 340 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 BspryQ80YW5 473 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Dppa4Q8CCG4 296 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 RfkQ8CFV9 155 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Plekhg6Q8R0J1 787 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 DenrQ9CQJ6 198 aaKnown RBP10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Vps28Q9D1C8 221 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 AllcQ9JHX6 414 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ybx3Q9JKB3 361 aaKnown RBP10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ttll3A4Q9E5 927 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Mpzl2O70255 215 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gnpda1O88958 289 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Akap3O88987 864 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Nr0b1Q61066 472 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fcrl5Q68SN8 596 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Rell1Q8K2J7 272 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tmem150aQ91WN2 271 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tspan3Q9QY33 253 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tmem131lQ3U3D7 1597 aa10.13□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm14781A2A9Q9 366 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ptar1E9QAB6 424 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm10479K7N6H4 105 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 AnpepP97449 966 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gpr149Q3UVY1 732 aa10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms