RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 TACC2O95359 2948 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 DNHD1Q96M86 4753 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 CCDC187A0A096LP49 1063 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 SPTY2D1-AS1A0A0U1RR47 76 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 A0A1W2PQM1 296 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 A0A1W2PQU0 124 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 MCF2LO15068 1137 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 MUSKO15146 869 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 ALOX15BO15296 676 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 SLC31A1O15431 190 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 MAFKO60675 156 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 RNASEH1O60930 286 aaKnown RBP7.45□□□□□ -1.22
PHGDH-225ENST00000641720 GCATO75600 419 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 TNFSF15O95150 251 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 IL1BP01584 269 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 CSF2P04141 144 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 SLC5A2P31639 672 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 CXCR5P32302 372 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 RGRP47804 291 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 COPS2P61201 443 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 ST8SIA6P61647 398 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 GNG11P61952 73 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 SFSWAPQ12872 951 aaKnown RBP7.45□□□□□ -1.22
PHGDH-225ENST00000641720 EIF2B5Q13144 721 aaKnown RBP7.45□□□□□ -1.22
PHGDH-225ENST00000641720 TFDP2Q14188 446 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 PRKD1Q15139 912 aaPredicted RBP7.45□□□□□ -1.22
PHGDH-225ENST00000641720 DLG2Q15700 870 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 HS1BP3Q53T59 392 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 ZNF542PQ5EBM4 170 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 ATXN7L2Q5T6C5 722 aaPredicted RBP7.45□□□□□ -1.22
PHGDH-225ENST00000641720 SEL1L3Q68CR1 1132 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 CRTC1Q6UUV9 634 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 KYAT3Q6YP21 454 aaKnown RBP7.45□□□□□ -1.22
PHGDH-225ENST00000641720 EFL1Q7Z2Z2 1120 aaKnown RBP7.45□□□□□ -1.22
PHGDH-225ENST00000641720 HORMAD1Q86X24 394 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 PGBD5Q8N414 524 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 ATP11CQ8NB49 1132 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 CHST14Q8NCH0 376 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 OR6K2Q8NGY2 324 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 WDR36Q8NI36 951 aaKnown RBP7.45□□□□□ -1.22
PHGDH-225ENST00000641720 ACTL9Q8TC94 416 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 COG1Q8WTW3 980 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 ATG4AQ8WYN0 398 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 KLK6Q92876 244 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 CCDC97Q96F63 343 aaPredicted RBP7.45□□□□□ -1.22
PHGDH-225ENST00000641720 EXOC2Q96KP1 924 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 QKIQ96PU8 341 aaKnown RBP eCLIP7.45□□□□□ -1.22
PHGDH-225ENST00000641720 TM6SF2Q9BZW4 377 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 FAM117AQ9C073 453 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 CARD9Q9H257 536 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 C10orf88Q9H8K7 445 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 SP110Q9HB58 689 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 GEMIN8Q9NWZ8 242 aaKnown RBP7.45□□□□□ -1.22
PHGDH-225ENST00000641720 DONSONQ9NYP3 566 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 JRKLQ9Y4A0 524 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 CSNK1G3Q9Y6M4 447 aa7.45□□□□□ -1.22
PHGDH-225ENST00000641720 MTORP42345 2549 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 ZSCAN5CA6NGD5 496 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-225ENST00000641720 APOC4-APOC2K7ER74 178 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 KCNK1O00180 336 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 BNIP3LO60238 219 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 APOC2P02655 101 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 CELA2BP08218 269 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-225ENST00000641720 ZFXP17010 805 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-225ENST00000641720 HNRNPA2B1P22626 353 aaKnown RBP7.44□□□□□ -1.22
PHGDH-225ENST00000641720 ETV5P41161 510 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 CLCN6P51797 869 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 GEMIN4P57678 1058 aaKnown RBP7.44□□□□□ -1.22
PHGDH-225ENST00000641720 PFN3P60673 137 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 CYP4F2P78329 520 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 OTUD4Q01804 1114 aaKnown RBP7.44□□□□□ -1.22
PHGDH-225ENST00000641720 IL10RBQ08334 325 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 PPIDQ08752 370 aaKnown RBP7.44□□□□□ -1.22
PHGDH-225ENST00000641720 SLC10A7Q0GE19 358 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 ZBTB17Q13105 803 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 STAT4Q14765 748 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 NOMO1Q15155 1222 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 CYTH1Q15438 398 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 SIX1Q15475 284 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-225ENST00000641720 ACCSLQ4AC99 568 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 SEL1L2Q5TEA6 688 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 CCDC181Q5TID7 509 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 NEK5Q6P3R8 708 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 RBM44Q6ZP01 1051 aaKnown RBP7.44□□□□□ -1.22
PHGDH-225ENST00000641720 NYAP1Q6ZVC0 841 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 TMPRSS9Q7Z410 1059 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 SLC13A5Q86YT5 568 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-225ENST00000641720 RBFAQ8N0V3 343 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 OR2A12Q8NGT7 310 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 MAML1Q92585 1016 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 HDAC11Q96DB2 347 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 NSMCE3Q96MG7 304 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 TSGA13Q96PP4 275 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 DUSP23Q9BVJ7 150 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 SLC12A9Q9BXP2 914 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 MAK16Q9BXY0 300 aaKnown RBP7.44□□□□□ -1.22
PHGDH-225ENST00000641720 CEP41Q9BYV8 373 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 CEP44Q9C0F1 390 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 CLPBQ9H078 707 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 HPCAL4Q9UM19 191 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms