RNA–Protein interactions for RNA: ENST00000640104.1

SPIN3-235, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-235ENST00000640104 HOXB8P17481 243 aaPredicted RBP13.33□□□□□ -0.28
SPIN3-235ENST00000640104 FMO4P31512 558 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 ALDH1A3P47895 512 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 PKNOX1P55347 436 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 HERVK_113P63132 956 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 NFKB2Q00653 900 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 DSG1Q02413 1049 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 GALNT1Q10472 559 aaPredicted RBP13.33□□□□□ -0.28
SPIN3-235ENST00000640104 RFTN1Q14699 578 aaPredicted RBP13.33□□□□□ -0.28
SPIN3-235ENST00000640104 LRRC36Q1X8D7 754 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 UNC50Q53HI1 259 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 SPOUT1Q5T280 376 aaKnown RBP13.33□□□□□ -0.28
SPIN3-235ENST00000640104 CXorf57Q6NSI4 855 aaKnown RBP13.33□□□□□ -0.28
SPIN3-235ENST00000640104 AFTPHQ6ULP2 937 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 CHST9Q7L1S5 443 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 ADGRG6Q86SQ4 1221 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 RNF148Q8N7C7 305 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 UCMAQ8WVF2 138 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 DEFB118Q96PH6 123 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 ZBED2Q9BTP6 218 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 TRMOQ9BU70 441 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 ERVK-6Q9BXR3 956 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 WDR41Q9HAD4 459 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 FNDC3AQ9Y2H6 1198 aaKnown RBP13.33□□□□□ -0.28
SPIN3-235ENST00000640104 RAI2Q9Y5P3 530 aa13.33□□□□□ -0.28
SPIN3-235ENST00000640104 STX16-NPEPL1H3BU86 382 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 SMNDC1O75940 238 aaKnown RBP eCLIP13.32□□□□□ -0.28
SPIN3-235ENST00000640104 RHOBTB1O94844 696 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 SIX3O95343 332 aaPredicted RBP13.32□□□□□ -0.28
SPIN3-235ENST00000640104 CXCL10P02778 98 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 RAG1P15918 1043 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 DPP6P42658 865 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 ARF5P84085 180 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 CDC16Q13042 620 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 TAF1AQ15573 450 aaPredicted RBP13.32□□□□□ -0.28
SPIN3-235ENST00000640104 PGAM4Q8N0Y7 254 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 EFHBQ8N7U6 833 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 TMA16Q96EY4 203 aaKnown RBP13.32□□□□□ -0.28
SPIN3-235ENST00000640104 ECSITQ9BQ95 431 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 EFCAB1Q9HAE3 211 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 POPDC3Q9HBV1 291 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 INTS10Q9NVR2 710 aaKnown RBP13.32□□□□□ -0.28
SPIN3-235ENST00000640104 ADAMTS6Q9UKP5 1117 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 TBC1D30Q9Y2I9 924 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 ATP6AP2A0A1C7CYW4 349 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 LRRC14BA6NHZ5 514 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 C2orf81A6NN90 581 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 UBDO15205 165 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 SNAP91O60641 907 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 FKTNO75072 461 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 ATP6AP2O75787 350 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 C1RP00736 705 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 MSX2P35548 267 aaPredicted RBP13.32□□□□□ -0.28
SPIN3-235ENST00000640104 CDKN1CP49918 316 aaPredicted RBP13.32□□□□□ -0.28
SPIN3-235ENST00000640104 PTPRRQ15256 657 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 PFKFB4Q16877 469 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 IRGCQ6NXR0 463 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 CHSY3Q70JA7 882 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 MYRFLQ96LU7 910 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 CYP2S1Q96SQ9 504 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 KLF16Q9BXK1 252 aaPredicted RBP13.32□□□□□ -0.28
SPIN3-235ENST00000640104 ARIH1Q9Y4X5 557 aaPredicted RBP13.32□□□□□ -0.28
SPIN3-235ENST00000640104 TRIM17Q9Y577 477 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 NDUFS3O75489 264 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 SRP72O76094 671 aaKnown RBP13.32□□□□□ -0.28
SPIN3-235ENST00000640104 ABLIM3O94929 683 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 PENKP01210 267 aaPredicted RBP13.32□□□□□ -0.28
SPIN3-235ENST00000640104 INHBCP55103 352 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 ILF2Q12905 390 aaKnown RBP13.32□□□□□ -0.28
SPIN3-235ENST00000640104 PIGGQ5H8A4 983 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 LPCAT4Q643R3 524 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 PAQR3Q6TCH7 311 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 KBTBD6Q86V97 674 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 SNX31Q8N9S9 440 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 TTC16Q8NEE8 873 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 HMGCLL1Q8TB92 370 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 LPGAT1Q92604 370 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 MIEF2Q96C03 454 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 CCDC68Q9H2F9 335 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 TRPC7Q9HCX4 862 aa13.32□□□□□ -0.28
SPIN3-235ENST00000640104 A0A0U1RQS6 177 aa13.31□□□□□ -0.28
SPIN3-235ENST00000640104 H3BNX3 289 aa13.31□□□□□ -0.28
SPIN3-235ENST00000640104 PPP6CO00743 305 aa13.31□□□□□ -0.28
SPIN3-235ENST00000640104 GPC4O75487 556 aa13.31□□□□□ -0.28
SPIN3-235ENST00000640104 TMCC1O94876 653 aa13.31□□□□□ -0.28
SPIN3-235ENST00000640104 F11P03951 625 aa13.31□□□□□ -0.28
SPIN3-235ENST00000640104 HSPA1AP0DMV8 641 aaKnown RBP13.31□□□□□ -0.28
SPIN3-235ENST00000640104 HSPA1BP0DMV9 641 aaKnown RBP13.31□□□□□ -0.28
SPIN3-235ENST00000640104 MTHFD2P13995 350 aa13.31□□□□□ -0.28
SPIN3-235ENST00000640104 XRCC1P18887 633 aaPredicted RBP13.31□□□□□ -0.28
SPIN3-235ENST00000640104 MRPS35P82673 323 aaKnown RBP13.31□□□□□ -0.28
SPIN3-235ENST00000640104 CEACAM7Q14002 265 aa13.31□□□□□ -0.28
SPIN3-235ENST00000640104 SQLEQ14534 574 aa13.31□□□□□ -0.28
SPIN3-235ENST00000640104 ZNF423Q2M1K9 1284 aa13.31□□□□□ -0.28
SPIN3-235ENST00000640104 CYHR1Q6ZMK1 362 aa13.31□□□□□ -0.28
SPIN3-235ENST00000640104 TMCO2Q7Z6W1 182 aaPredicted RBP13.31□□□□□ -0.28
SPIN3-235ENST00000640104 CARNMT1Q8N4J0 409 aa13.31□□□□□ -0.28
SPIN3-235ENST00000640104 ATOH8Q96SQ7 321 aa13.31□□□□□ -0.28
SPIN3-235ENST00000640104 BPIFA1Q9NP55 256 aa13.31□□□□□ -0.28
SPIN3-235ENST00000640104 CCDC167Q9P0B6 97 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms