RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ITM2CQ9NQX7 267 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 IFT80Q9P2H3 777 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 ASIC3Q9UHC3 531 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 CLEC4EQ9ULY5 219 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 UTP11Q9Y3A2 253 aaKnown RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 OR51B4Q9Y5P0 310 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 C5orf60A6NFR6 353 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 ANHXE9PGG2 379 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 BOLA2-SMG1P6H3BVE0 249 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 J3KR12 359 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 EIF3FO00303 357 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 SHOXO15266 292 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 HOXC11O43248 304 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 GCATO75600 419 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 UBXN7O94888 489 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 NFATC1O95644 943 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 PEX11BO96011 259 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 GHRHP01286 108 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 ADH5P11766 374 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 PSMC3P17980 439 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 RPL22P35268 128 aaKnown RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 VPS41P49754 854 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 SH3BGRP55822 239 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 IL10RBQ08334 325 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 HTR4Q13639 388 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 TRADDQ15628 312 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 P3H1Q32P28 736 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 FAM182AQ5T1J6 154 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 TIGD7Q6NT04 549 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 HIBCHQ6NVY1 386 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 CCDC117Q8IWD4 279 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 CCDC110Q8TBZ0 833 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 CCHCR1Q8TD31 782 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 MARVELD3Q96A59 401 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 ALG14Q96F25 216 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 ZNF419Q96HQ0 510 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 LMLNQ96KR4 655 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 CCDC74BQ96LY2 380 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 BARD1Q99728 777 aaKnown RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 FERMT1Q9BQL6 677 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 FEM1AQ9BSK4 669 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 RPP25Q9BUL9 199 aaKnown RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 TRIM31Q9BZY9 425 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 WNT10AQ9GZT5 417 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 CCDC86Q9H6F5 360 aaKnown RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 SP110Q9HB58 689 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 PDFQ9HBH1 243 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 EPB41L5Q9HCM4 733 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 HPS4Q9NQG7 708 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 NKIRAS2Q9NYR9 191 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 SEPT10Q9P0V9 454 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 NUMBLQ9Y6R0 609 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 MYO10Q9HD67 2058 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 A0A0A0MRY4 1105 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 TRIM64A6NGJ6 449 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 OTOL1A6NHN0 477 aaPredicted RBP8.05□□□□□ -1.12
SCARB2-220ENST00000640076 TRIM64BA6NI03 449 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 B4E171 279 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 MATN3O15232 486 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 KDELR3O43731 214 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 CACNG3O60359 315 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 PRAMEF11O60813 436 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 CSTBP04080 98 aaKnown RBP8.05□□□□□ -1.12
SCARB2-220ENST00000640076 CCNB1P14635 433 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 GRK2P25098 689 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 PTPN3P26045 913 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 IVDP26440 423 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 HLA-FP30511 346 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 ADCY8P40145 1251 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 CSKP41240 450 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 RPL21P46778 160 aaKnown RBP8.05□□□□□ -1.12
SCARB2-220ENST00000640076 NUMBP49757 651 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 DRG2P55039 364 aaKnown RBP8.05□□□□□ -1.12
SCARB2-220ENST00000640076 OXCT1P55809 520 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 HSD17B7P56937 341 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 IFI35P80217 286 aaPredicted RBP8.05□□□□□ -1.12
SCARB2-220ENST00000640076 TNK2Q07912 1038 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 LMAN2Q12907 356 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 GPS1Q13098 491 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 ZBTB17Q13105 803 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 LEXMQ3ZCV2 418 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 FAM209BQ5JX69 171 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 ITPRIPL1Q6GPH6 555 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 YAF2Q8IY57 180 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 ZNF567Q8N184 647 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 ZNF557Q8N988 423 aaPredicted RBP8.05□□□□□ -1.12
SCARB2-220ENST00000640076 UHMK1Q8TAS1 419 aaKnown RBP8.05□□□□□ -1.12
SCARB2-220ENST00000640076 MAML1Q92585 1016 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 RUBCNQ92622 972 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 KCTD12Q96CX2 325 aaKnown RBP8.05□□□□□ -1.12
SCARB2-220ENST00000640076 SPATA13Q96N96 652 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 IL12RB2Q99665 862 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 CEP41Q9BYV8 373 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 DPH5Q9H2P9 285 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 ECT2Q9H8V3 914 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 GP6Q9HCN6 339 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 ATP13A1Q9HD20 1204 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 GDF3Q9NR23 364 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 VPS28Q9UK41 221 aa8.05□□□□□ -1.12
SCARB2-220ENST00000640076 SNX24Q9Y343 169 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms