RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 C1DQ13901 141 aaKnown RBP5.02□□□□□ -1.61
SCN1A-218ENST00000640036 DPCR1Q3MIW9 517 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 LRRC74BQ6ZQY2 392 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 HEATR4Q86WZ0 1026 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 EID2Q8N6I1 236 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 B4GALNT2Q8NHY0 566 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 HAVCR1Q96D42 359 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 SNF8Q96H20 258 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 RNF121Q9H920 327 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 TIGARQ9NQ88 270 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 CREBBPQ92793 2442 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 CACNA1SQ13698 1873 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 H3BNC9 293 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 TSPAN6O43657 245 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 CHP2O43745 196 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 RBP1P09455 135 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 ZNF865P0CJ78 1059 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-218ENST00000640036 RXRGP48443 463 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 FNTBP49356 437 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 DMPKQ09013 629 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 EPS8Q12929 822 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 EMC1Q8N766 993 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 PCYOX1LQ8NBM8 494 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 OVCA2Q8WZ82 227 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 MAML1Q92585 1016 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 PCED1BQ96HM7 432 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 MS4A4AQ96JQ5 239 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 RBBP8Q99708 897 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 LPIN3Q9BQK8 851 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 SIKE1Q9BRV8 207 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 INTS9Q9NV88 658 aaKnown RBP5.02□□□□□ -1.61
SCN1A-218ENST00000640036 MTRRQ9UBK8 725 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 STXBP5LQ9Y2K9 1186 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 GMEB1Q9Y692 573 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 CYP3A7-CYP3A51PA0A087WV96 503 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 A6NL46 340 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 TGM5O43548 720 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 AKAP8O43823 692 aaKnown RBP5.02□□□□□ -1.61
SCN1A-218ENST00000640036 SUPT7LO94864 414 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 FGF1P05230 155 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 CCDC166P0CW27 439 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 CCNB1P14635 433 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 NT5EP21589 574 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 CD72P21854 359 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 CYP3A7P24462 503 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 MAPKAPK2P49137 400 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 GCNT1Q02742 428 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 ACSM2AQ08AH3 577 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 FAAP100Q0VG06 881 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 RAB33AQ14088 237 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 SPARCL1Q14515 664 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 CAPN13Q6MZZ7 669 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-218ENST00000640036 CCDC137Q6PK04 289 aaKnown RBP5.02□□□□□ -1.61
SCN1A-218ENST00000640036 TMEFF1Q8IYR6 380 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 AGBL5Q8NDL9 886 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 OR4K17Q8NGC6 315 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 OR2T3Q8NH03 318 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 SNX27Q96L92 541 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 SGIP1Q9BQI5 828 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 TAPBPLQ9BX59 468 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 RRAGDQ9NQL2 400 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-218ENST00000640036 ATAD3AQ9NVI7 634 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 SLC39A1Q9NY26 324 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 ACAD8Q9UKU7 415 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 INTUQ9ULD6 942 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 N6AMT1Q9Y5N5 214 aa5.02□□□□□ -1.61
SCN1A-218ENST00000640036 A0A1W2PP55 124 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 WASHC1A8K0Z3 465 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 WASH3PC4AMC7 463 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 PRAMEF26H0Y7S4 382 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 NBNO60934 754 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 IL33O95760 270 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 RHOQP17081 205 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 CD38P28907 300 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 HSD17B2P37059 387 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 SPAM1P38567 509 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 STX5Q13190 355 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 CUL3Q13618 768 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 ACSM2BQ68CK6 577 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 RFWD3Q6PCD5 774 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 WASH2PQ6VEQ5 465 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 SLC9A9Q8IVB4 645 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 FBXO15Q8NCQ5 510 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-218ENST00000640036 IER2Q9BTL4 223 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 AP1M1Q9BXS5 423 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 SPTBN1Q01082 2364 aaKnown RBP5.01□□□□□ -1.61
SCN1A-218ENST00000640036 PSTPIP1O43586 416 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 ACP5P13686 325 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 TYRP1P17643 537 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 VIPR2P41587 438 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 PRKAG1P54619 331 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 BMT2Q1RMZ1 405 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.01□□□□□ -1.613e-6■■■□□ 18.5
SCN1A-218ENST00000640036 AFTPHQ6ULP2 937 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 TRMT10CQ7L0Y3 403 aaKnown RBP5.01□□□□□ -1.61
SCN1A-218ENST00000640036 TRMT2AQ8IZ69 625 aaKnown RBP5.01□□□□□ -1.61
SCN1A-218ENST00000640036 PLA2G15Q8NCC3 412 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 ZNF555Q8NEP9 628 aa5.01□□□□□ -1.61
SCN1A-218ENST00000640036 CLCC1Q96S66 551 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms