RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 WNT7BP56706 349 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 RPL38P63173 70 aaKnown RBP13.61□□□□□ -0.23
SCARB2-215ENST00000639145 SLC20A2Q08357 652 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 INCA1Q0VD86 236 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 SPDYCQ5MJ68 293 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 TRABD2AQ86V40 505 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 MMAAQ8IVH4 418 aaKnown RBP13.61□□□□□ -0.23
SCARB2-215ENST00000639145 C10orf107Q8IVU9 208 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 CKAP2Q8WWK9 683 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 ACDQ96AP0 544 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 SCHIP1Q9P0W5 487 aaPredicted RBP13.61□□□□□ -0.23
SCARB2-215ENST00000639145 SLC17A7Q9P2U7 560 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 TBC1D30Q9Y2I9 924 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 KANSL1LA0AUZ9 987 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 GCATO75600 419 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 CYP4F2P78329 520 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 ECT2LQ008S8 904 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 USP4Q13107 963 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 ZNF784Q8NCA9 323 aaPredicted RBP13.61□□□□□ -0.23
SCARB2-215ENST00000639145 BPIFB1Q8TDL5 484 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 KCTD13Q8WZ19 329 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 AZIN2Q96A70 460 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 EBF3Q9H4W6 596 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 PCDH12Q9NPG4 1184 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 KLHL28Q9NXS3 571 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 IGKV6D-21A0A0A0MT36 114 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 IGKV6-21A0A0C4DH24 114 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 LRRC72A6NJI9 287 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 ZMPSTE24O75844 475 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 PROCP04070 461 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 CCR4P51679 360 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 PKNOX1P55347 436 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 SF1Q15637 639 aaKnown RBP13.61□□□□□ -0.23
SCARB2-215ENST00000639145 TJAP1Q5JTD0 557 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 LY6G5CQ5SRR4 150 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 RNASEH2BQ5TBB1 312 aaKnown RBP13.61□□□□□ -0.23
SCARB2-215ENST00000639145 Q6ZVU0 165 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 CHST15Q7LFX5 561 aaPredicted RBP13.61□□□□□ -0.23
SCARB2-215ENST00000639145 DENND6AQ8IWF6 608 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 MREGQ8N565 214 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 BEND7Q8N7W2 519 aaPredicted RBP13.61□□□□□ -0.23
SCARB2-215ENST00000639145 UBE2E3Q969T4 207 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 CDRT15Q96T59 188 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 PACSIN3Q9UKS6 424 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 CDV3Q9UKY7 258 aaKnown RBP13.61□□□□□ -0.23
SCARB2-215ENST00000639145 GNEQ9Y223 722 aaKnown RBP13.61□□□□□ -0.23
SCARB2-215ENST00000639145 TCAF1Q9Y4C2 921 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 HS3ST4Q9Y661 456 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 MAP2K7O14733 419 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 MLYCDO95822 493 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 IDSP22304 550 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 SPIDRQ14159 915 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 CERS6Q6ZMG9 384 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 HDDC3Q8N4P3 179 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 SMAD5Q99717 465 aaKnown RBP13.6□□□□□ -0.23
SCARB2-215ENST00000639145 MYO5AQ9Y4I1 1855 aaKnown RBP13.6□□□□□ -0.23
SCARB2-215ENST00000639145 J3KR12 359 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 ATG13O75143 517 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 TNFRSF8P28908 595 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 PTPN4P29074 926 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 TM4SF4P48230 202 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 DGKEP52429 567 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 TAF8Q7Z7C8 310 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 ATG16L2Q8NAA4 619 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 ZSCAN18Q8TBC5 510 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-215ENST00000639145 CRYGNQ8WXF5 182 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 NXNL1Q96CM4 212 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 LIMD1Q9UGP4 676 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 SCML2Q9UQR0 700 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 LAMB4A4D0S4 1761 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 NPEPPSL1A6NEC2 478 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 VIPP01282 170 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 IFNA14P01570 189 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 FRG1Q14331 258 aaKnown RBP13.6□□□□□ -0.23
SCARB2-215ENST00000639145 GRM2Q14416 872 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 SNX30Q5VWJ9 437 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 HID1Q8IV36 788 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 DNAJC9Q8WXX5 260 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 TPD52L3Q96J77 140 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 PIWIL1Q96J94 861 aaKnown RBP13.6□□□□□ -0.23
SCARB2-215ENST00000639145 QRFPRQ96P65 431 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 SLC25A23Q9BV35 468 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 RPS6KB2Q9UBS0 482 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 A0A1W2PQ67 120 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 LRATO95237 230 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 OTCP00480 354 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 FAM163BP0C2L3 166 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 GRIA1P42261 906 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 HADHBP55084 474 aaKnown RBP13.6□□□□□ -0.23
SCARB2-215ENST00000639145 ILF3Q12906 894 aaKnown RBP eCLIP13.6□□□□□ -0.23
SCARB2-215ENST00000639145 NAE1Q13564 534 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 OTUD3Q5T2D3 398 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-215ENST00000639145 TSTD2Q5T7W7 516 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 TRMT10BQ6PF06 316 aaKnown RBP13.6□□□□□ -0.23
SCARB2-215ENST00000639145 SERPINA9Q86WD7 417 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 BTN2A2Q8WVV5 523 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 SLC44A1Q8WWI5 657 aa13.6□□□□□ -0.23
SCARB2-215ENST00000639145 HDAC3O15379 428 aa13.59□□□□□ -0.23
SCARB2-215ENST00000639145 FFAR2O15552 330 aa13.59□□□□□ -0.23
SCARB2-215ENST00000639145 CNTN5O94779 1100 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms