RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 DEFB132Q7Z7B7 95 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 CILP2Q8IUL8 1156 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 DDIASQ8IXT1 998 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 MIER2Q8N344 545 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 PTGR2Q8N8N7 351 aaPredicted RBP10.92□□□□□ -0.66
SNIP1-204ENST00000638725 OR13J1Q8NGT2 312 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 OR6P1Q8NGX9 317 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 NSUN5Q96P11 429 aaKnown RBP10.92□□□□□ -0.66
SNIP1-204ENST00000638725 MID1IP1Q9NPA3 183 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 MARCH4Q9P2E8 410 aaPredicted RBP10.92□□□□□ -0.66
SNIP1-204ENST00000638725 BTRCQ9Y297 605 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 NYNRINQ9P2P1 1898 aaKnown RBP10.91□□□□□ -0.66
SNIP1-204ENST00000638725 MSI1O43347 362 aaKnown RBP10.91□□□□□ -0.66
SNIP1-204ENST00000638725 RASAL1O95294 804 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 WISP3O95389 354 aaPredicted RBP10.91□□□□□ -0.66
SNIP1-204ENST00000638725 NCK1P16333 377 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 BDNFP23560 247 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 AFF1P51825 1210 aaKnown RBP10.91□□□□□ -0.66
SNIP1-204ENST00000638725 MAXP61244 160 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 HERVK_113P63132 956 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 TNK2Q07912 1038 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 BNIP2Q12982 314 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 PRMT9Q6P2P2 845 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 KDELC1Q6UW63 502 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 PHYKPLQ8IUZ5 450 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 C3orf58Q8NDZ4 430 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 TRPV3Q8NET8 790 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 TBC1D15Q8TC07 691 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 SLC16A10Q8TF71 515 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 LRRC58Q96CX6 371 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 SMARCD1Q96GM5 515 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 PPP1R10Q96QC0 940 aaKnown RBP10.91□□□□□ -0.66
SNIP1-204ENST00000638725 ERVK-6Q9BXR3 956 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 TSPYL2Q9H2G4 693 aaPredicted RBP10.91□□□□□ -0.66
SNIP1-204ENST00000638725 TUBB1Q9H4B7 451 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 MPP6Q9NZW5 540 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 CRYL1Q9Y2S2 319 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 SMIM35A0A1B0GVV1 85 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 PAGE1O75459 146 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 HOXD8P13378 290 aaPredicted RBP10.91□□□□□ -0.66
SNIP1-204ENST00000638725 DCKP27707 260 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 BNIP3Q12983 259 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 PLCL1Q15111 1095 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 NEDD8Q15843 81 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 DUSP28Q4G0W2 176 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 RABL3Q5HYI8 236 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 TMTC4Q5T4D3 741 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 TWF2Q6IBS0 349 aaKnown RBP10.91□□□□□ -0.66
SNIP1-204ENST00000638725 ABRAXAS1Q6UWZ7 409 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 KCTD8Q6ZWB6 473 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 ANKRD13AQ8IZ07 590 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 DHRSXQ8N5I4 330 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 DNAJB14Q8TBM8 379 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 MAGEE2Q8TD90 523 aaPredicted RBP10.91□□□□□ -0.66
SNIP1-204ENST00000638725 MYLPFQ96A32 169 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 TUBGCP3Q96CW5 907 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 TBC1D23Q9NUY8 699 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 SLC38A7Q9NVC3 462 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 POLR3BQ9NW08 1133 aaPredicted RBP10.91□□□□□ -0.66
SNIP1-204ENST00000638725 SH3GLB1Q9Y371 365 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 V9GYQ6 96 aa10.91□□□□□ -0.66
SNIP1-204ENST00000638725 TTC24A2A3L6 582 aaPredicted RBP10.9□□□□□ -0.66
SNIP1-204ENST00000638725 UBXN8O00124 270 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 SUPT3HO75486 399 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 SNAP29O95721 258 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 S1PR4O95977 384 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 MOCS2O96007 188 aaPredicted RBP10.9□□□□□ -0.66
SNIP1-204ENST00000638725 LINC00032P0C843 101 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 HGFP14210 728 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 CAPGP40121 348 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 LHX1P48742 406 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 SERPINH1P50454 418 aaKnown RBP10.9□□□□□ -0.66
SNIP1-204ENST00000638725 CDC42EP1Q00587 391 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 PCBP1Q15365 356 aaKnown RBP eCLIP10.9□□□□□ -0.66
SNIP1-204ENST00000638725 CYBRD1Q53TN4 286 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.9□□□□□ -0.66
SNIP1-204ENST00000638725 FCRL2Q96LA5 508 aaPredicted RBP10.9□□□□□ -0.66
SNIP1-204ENST00000638725 DOK1Q99704 481 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 SEZ6LQ9BYH1 1024 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 SMPD3Q9NY59 655 aaPredicted RBP10.9□□□□□ -0.66
SNIP1-204ENST00000638725 NUDT5Q9UKK9 219 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 KCTD3Q9Y597 815 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 PCDHA9Q9Y5H5 950 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 PTCH2Q9Y6C5 1203 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 A0A1B0GTL3 188 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 H3BMM5 538 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 AZIN1O14977 448 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 IRAK2O43187 625 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 CES1P23141 567 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 RFC2P35250 354 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 GSK3BP49841 420 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 CCR3P51677 355 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 CLCNKBP51801 687 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 DIO3P55073 304 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 ITKQ08881 620 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 CBX3Q13185 183 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 RPS6KA2Q15349 733 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 FUT11Q495W5 492 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 FBXO48Q5FWF7 155 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 ARTNQ5T4W7 220 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms