RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 SEMA4CQ9C0C4 833 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 THAP2Q9H0W7 228 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 TRNAU1APQ9NX07 287 aaKnown RBP18.45■□□□□ 0.54
CLN6-220ENST00000637450 PISDQ9UG56 409 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 IP6K2Q9UHH9 426 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 UNC13CQ8NB66 2214 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 A0A1W2PQJ5 194 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 NPIPB15A6NHN6 443 aaPredicted RBP18.44■□□□□ 0.54
CLN6-220ENST00000637450 B4GAT1O43505 415 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 CDK3Q00526 305 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 ILF3Q12906 894 aaKnown RBP eCLIP18.44■□□□□ 0.54
CLN6-220ENST00000637450 LY6DQ14210 128 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 PTPRRQ15256 657 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 TDRD12Q587J7 1177 aaKnown RBP18.44■□□□□ 0.54
CLN6-220ENST00000637450 ARMC12Q5T9G4 340 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 KIAA1614Q5VZ46 1190 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 CAVIN1Q6NZI2 390 aaKnown RBP18.44■□□□□ 0.54
CLN6-220ENST00000637450 TECPR1Q7Z6L1 1165 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 TSPAN33Q86UF1 283 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 SLITRK4Q8IW52 837 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 TEX26Q8N6G2 289 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 ZDHHC1Q8WTX9 485 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 FUCA2Q9BTY2 467 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 TAAR2Q9P1P5 351 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 SUFUQ9UMX1 484 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 SLC17A4Q9Y2C5 497 aa18.44■□□□□ 0.54
CLN6-220ENST00000637450 CYP1A2P05177 515 aa18.43■□□□□ 0.54
CLN6-220ENST00000637450 PBX1P40424 430 aa18.43■□□□□ 0.54
CLN6-220ENST00000637450 GNPDA1P46926 289 aa18.43■□□□□ 0.54
CLN6-220ENST00000637450 MAZP56270 477 aaKnown RBP18.43■□□□□ 0.54
CLN6-220ENST00000637450 DPTQ07507 201 aa18.43■□□□□ 0.54
CLN6-220ENST00000637450 RAET1GQ6H3X3 334 aa18.43■□□□□ 0.54
CLN6-220ENST00000637450 USP45Q70EL2 814 aa18.43■□□□□ 0.54
CLN6-220ENST00000637450 FAM71BQ8TC56 605 aa18.43■□□□□ 0.54
CLN6-220ENST00000637450 PTCD2Q8WV60 388 aaKnown RBP18.43■□□□□ 0.54
CLN6-220ENST00000637450 CMKLR1Q99788 373 aa18.43■□□□□ 0.54
CLN6-220ENST00000637450 NUP85Q9BW27 656 aa18.43■□□□□ 0.54
CLN6-220ENST00000637450 SUDS3Q9H7L9 328 aaPredicted RBP18.43■□□□□ 0.54
CLN6-220ENST00000637450 NT5MQ9NPB1 228 aa18.43■□□□□ 0.54
CLN6-220ENST00000637450 RCOR3Q9P2K3 495 aaPredicted RBP18.43■□□□□ 0.54
CLN6-220ENST00000637450 ANAPC7Q9UJX3 599 aa18.43■□□□□ 0.54
CLN6-220ENST00000637450 ST14Q9Y5Y6 855 aa18.43■□□□□ 0.54
CLN6-220ENST00000637450 PIEZO2Q9H5I5 2752 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 FLNBO75369 2602 aaKnown RBP18.42■□□□□ 0.54
CLN6-220ENST00000637450 FZD6O60353 706 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 ECEL1O95672 775 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 SERPING1P05155 500 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 IVLP07476 585 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 PDHA1P08559 390 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 CTPS1P17812 591 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 ITIH1P19827 911 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 AK4P27144 223 aaPredicted RBP18.42■□□□□ 0.54
CLN6-220ENST00000637450 POLD2P49005 469 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 OR1D5P58170 312 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 CTBSQ01459 385 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 MMRN1Q13201 1228 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 KRT81Q14533 505 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 NR1D2Q14995 579 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 TGIF1Q15583 401 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 ZNF438Q7Z4V0 828 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 PIM3Q86V86 326 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 SCARF2Q96GP6 870 aaPredicted RBP18.42■□□□□ 0.54
CLN6-220ENST00000637450 SEMA3CQ99985 751 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 SEMA6CQ9H3T2 930 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 ANKRD36A6QL64 1941 aa18.42■□□□□ 0.54
CLN6-220ENST00000637450 COL6A6A6NMZ7 2263 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 A0A087X0T9 212 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 PRAMEF33A0A0G2JMD5 474 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 A0A0U1RQS6 177 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 GOLGA6CA6NDK9 693 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 GOLGA6BA6NDN3 693 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 RHPN2P1A8MT19 583 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 MYO1FO00160 1098 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 PRAMEF10O60809 474 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 ZIC2O95409 532 aaPredicted RBP18.41■□□□□ 0.54
CLN6-220ENST00000637450 CPNE6O95741 557 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 CD48P09326 243 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 FAM228BP0C875 321 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 GOLGA6DP0CG33 693 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 LIPCP11150 499 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 KRT10P13645 584 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 ALDH4A1P30038 563 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 ADCY8P40145 1251 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 ETV5P41161 510 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 ARSEP51690 589 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 ZBED6P86452 979 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 FANCCQ00597 558 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 PTSQ03393 145 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 CLPPQ16740 277 aaPredicted RBP18.41■□□□□ 0.54
CLN6-220ENST00000637450 AMZ1Q400G9 498 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 RFLNAQ6ZTI6 216 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 NLRP8Q86W28 1048 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 NDUFAF2Q8N183 169 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 POLR1EQ9GZS1 481 aaKnown RBP18.41■□□□□ 0.54
CLN6-220ENST00000637450 ABCG8Q9H221 673 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 RDH14Q9HBH5 336 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 GOLGA6AQ9NYA3 693 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 CAPN11Q9UMQ6 739 aa18.41■□□□□ 0.54
CLN6-220ENST00000637450 AGRPO00253 132 aa18.4■□□□□ 0.54
CLN6-220ENST00000637450 ZW10O43264 779 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms