RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 GRM8O00222 908 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SLC33A1O00400 549 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 STX16O14662 325 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 TNPO2O14787 897 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 RAD51BO15315 384 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SLC16A6O15403 523 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SLC16A3O15427 465 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 KLK10O43240 276 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 LRRTM2O43300 516 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 DNAJB6O75190 326 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 CDC123O75794 336 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 RBBP9O75884 186 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 MYO1DO94832 1006 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 HEXIM1O94992 359 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 MATN4O95460 622 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 LGI1O95970 557 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 MT-ND5P03915 603 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 KLKB1P03952 638 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 CRYGCP07315 174 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 ABHD2P08910 425 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SPARCP09486 303 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 CLEC2LP0C7M8 214 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 UQCRFS1P1P0C7P4 283 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 MYZAPP0CAP1 466 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 PRR23D2P0DMB1 279 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 UMPSP11172 480 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SRCP12931 536 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 MTHFD2P13995 350 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 PKMP14618 531 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 NPPBP16860 134 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 EPORP19235 508 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 EN2P19622 333 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 AGAP20933 346 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SP100P23497 879 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 CFL1P23528 166 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 TKTP29401 623 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 SLC5A2P31639 672 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SFNP31947 248 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 ICAM3P32942 547 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 HK3P52790 923 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 CAPZA1P52907 286 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 PDE1AP54750 535 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 PRMT2P55345 433 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 NOMO3P69849 1222 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 CYP4F2P78329 520 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 PHEXP78562 749 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 MRPS9P82933 396 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 XIAPP98170 497 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 GCNT1Q02742 428 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 LGALS3BPQ08380 585 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 CYP4F3Q08477 520 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SRSF5Q13243 272 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 SCGB2A2Q13296 93 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 ITGB3BPQ13352 177 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 IL10RAQ13651 578 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 ALCAMQ13740 583 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SNTB1Q13884 538 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 CRYMQ14894 314 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 RRS1Q15050 365 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 NOMO1Q15155 1222 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 UGT8Q16880 541 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 KRT24Q2M2I5 525 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 NKAIN1Q4KMZ8 207 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 FAM98BQ52LJ0 330 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 PLA1AQ53H76 456 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 FASTKD1Q53R41 847 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 FIGNQ5HY92 759 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 NOMO2Q5JPE7 1267 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 COLEC12Q5KU26 742 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SAPCD1Q5SSQ6 148 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 CST9LP1Q5W188 147 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 ARL6IP4Q66PJ3 421 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 ANO7Q6IWH7 933 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 KLHL35Q6PF15 583 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 PSRC1Q6PGN9 363 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 FOXR2Q6PJQ5 311 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 MOXD1Q6UVY6 613 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 CYP2R1Q6VVX0 501 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 TRMT10CQ7L0Y3 403 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 KCTD9Q7L273 389 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SPATA19Q7Z5L4 167 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 BIVMQ86UB2 503 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 CXorf67Q86X51 503 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 RHOT2Q8IXI1 618 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SLC15A3Q8IY34 581 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 ST13P4Q8IZP2 240 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 ARHGEF39Q8N4T4 335 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SLC15A4Q8N697 577 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 MB21D1Q8N884 522 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 ENDOVQ8N8Q3 282 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 IL17RCQ8NAC3 791 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 CFAP61Q8NHU2 1237 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 LRRC8CQ8TDW0 803 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 NRG4Q8WWG1 115 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 OR1E3Q8WZA6 343 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 CFHR4Q92496 578 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 DPF1Q92782 380 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 DPF2Q92785 391 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 KAT2AQ92830 837 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 EDAQ92838 391 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms