RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 SERAC1Q96JX3 654 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 KLF6Q99612 283 aaPredicted RBP15.98■□□□□ 0.15
CLN6-216ENST00000636876 MYOCQ99972 504 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 MIR1-1HGQ9H1L0 117 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 DPH5Q9H2P9 285 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 FZD3Q9NPG1 666 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 KCTD5Q9NXV2 234 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.98■□□□□ 0.15
CLN6-216ENST00000636876 PKD2L2Q9NZM6 624 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 IL17CQ9P0M4 197 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 ANAPC5Q9UJX4 755 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 ARL5AQ9Y689 179 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 SLCO1B1Q9Y6L6 691 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 RGSL1A5PLK6 1076 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 C2orf81A6NN90 581 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 GOLGA8MH3BSY2 632 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 BUD23O43709 281 aaKnown RBP15.97■□□□□ 0.15
CLN6-216ENST00000636876 EPN2O95208 641 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 CRTAMO95727 393 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 LPOP22079 712 aaPredicted RBP15.97■□□□□ 0.15
CLN6-216ENST00000636876 NPY2RP49146 381 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 SLC7A5Q01650 507 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 SEPT6Q14141 434 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 LRRC14Q15048 493 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 IRF4Q15306 451 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 PEAR1Q5VY43 1037 aaPredicted RBP15.97■□□□□ 0.15
CLN6-216ENST00000636876 ZNF765Q7L2R6 523 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 TMEM145Q8NBT3 493 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 BBOF1Q8ND07 529 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 LRRN4CLQ8ND94 238 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 PIGKQ92643 395 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 CENPTQ96BT3 561 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 SERPINB12Q96P63 405 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 TM9SF3Q9HD45 589 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 RAD18Q9NS91 495 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 BFARQ9NZS9 450 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 WHRNQ9P202 907 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 NFKBIL1Q9UBC1 381 aaPredicted RBP15.97■□□□□ 0.15
CLN6-216ENST00000636876 PILRBQ9UKJ0 227 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 MYLKQ15746 1914 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 PLXNA2O75051 1894 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 BPTFQ12830 3046 aa15.97■□□□□ 0.15
CLN6-216ENST00000636876 ATXN2Q99700 1313 aaKnown RBP15.96■□□□□ 0.15
CLN6-216ENST00000636876 LAMA1P25391 3075 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 PROB1E7EW31 1015 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 TP73O15350 636 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 STX7O15400 261 aaKnown RBP15.96■□□□□ 0.15
CLN6-216ENST00000636876 LDB2O43679 373 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 BPIP17213 487 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 MGAT1P26572 445 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 HOXD12P35452 270 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 IGFALSP35858 605 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 DPP6P42658 865 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 MAGEA3P43357 314 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 ZNF140P52738 457 aaPredicted RBP15.96■□□□□ 0.15
CLN6-216ENST00000636876 DRG2P55039 364 aaKnown RBP15.96■□□□□ 0.15
CLN6-216ENST00000636876 DCDC1P59894 354 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 RACK1P63244 317 aaKnown RBP15.96■□□□□ 0.15
CLN6-216ENST00000636876 PDE1BQ01064 536 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 CALCOCO2Q13137 446 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 LAMB3Q13751 1172 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 SYT12Q8IV01 421 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 ZCCHC9Q8N567 271 aaKnown RBP15.96■□□□□ 0.15
CLN6-216ENST00000636876 SLC6A18Q96N87 628 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 RANBP9Q96S59 729 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 FRMD8Q9BZ67 464 aaPredicted RBP15.96■□□□□ 0.15
CLN6-216ENST00000636876 IL22Q9GZX6 179 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 CDH19Q9H159 772 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 ABCG8Q9H221 673 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 BPIFA1Q9NP55 256 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 MBNL1Q9NR56 388 aaKnown RBP15.96■□□□□ 0.15
CLN6-216ENST00000636876 AASDHPPTQ9NRN7 309 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 GRHL1Q9NZI5 618 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 SUSD2Q9UGT4 822 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 CD84Q9UIB8 345 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 CA5BQ9Y2D0 317 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 PKP3Q9Y446 797 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 KCTD3Q9Y597 815 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 PCDHGA5Q9Y5G8 931 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 HS3ST3A1Q9Y663 406 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 SCN8AQ9UQD0 1980 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 OTOGLQ3ZCN5 2332 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 KNL1Q8NG31 2342 aa15.96■□□□□ 0.15
CLN6-216ENST00000636876 CACNA1EQ15878 2313 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 HEATR9A2RTY3 570 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 MROH6A6NGR9 719 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 BHMG1C9JSJ3 638 aaPredicted RBP15.95■□□□□ 0.14
CLN6-216ENST00000636876 FPGTO14772 594 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 BCAT2O15382 392 aaPredicted RBP15.95■□□□□ 0.14
CLN6-216ENST00000636876 PPFIA2O75334 1257 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 AVILO75366 819 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 ADRA1DP25100 572 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 CLDN2P57739 230 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 CRADDP78560 199 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 DPTQ07507 201 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 MTM1Q13496 603 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 CCDC38Q502W7 563 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 PCID2Q5JVF3 399 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 ESRP1Q6NXG1 681 aaKnown RBP15.95■□□□□ 0.14
CLN6-216ENST00000636876 GCNT7Q6ZNI0 430 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms