RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 MARK4Q96L34 752 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ZDHHC15Q96MV8 337 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 HIPK3Q9H422 1215 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 CCSER2Q9H7U1 834 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 FARSBQ9NSD9 589 aaKnown RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ERVV-1B6SEH8 477 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 DNAJA2O60884 412 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 DRD4P21917 467 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 CDK7P50613 346 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 DPCR1Q3MIW9 517 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 KCNIP4Q6PIL6 250 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ARL9Q6T311 187 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 KIAA1324Q6UXG2 1013 aaKnown RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 TMEM110Q86TL2 294 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ZDHHC17Q8IUH5 632 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 OR4C6Q8NH72 309 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 MFSD3Q96ES6 412 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 LGR4Q9BXB1 951 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 LIN7CQ9NUP9 197 aaKnown RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 PCDHB15Q9Y5E8 787 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 OAS3Q9Y6K5 1087 aaKnown RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ARAP3Q8WWN8 1544 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ACTL6BO94805 426 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 TACSTD2P09758 323 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ANXA3P12429 323 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 HNF1BP35680 557 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ACTR1AP61163 376 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 FOXK1P85037 733 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 LLGL2Q6P1M3 1020 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 HIPK1Q86Z02 1210 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ANKRD13AQ8IZ07 590 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 NRSN1Q8IZ57 195 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF276Q8N554 614 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 OR52K1Q8NGK4 314 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 OR6Y1Q8NGX8 325 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SLC35G2Q8TBE7 412 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 CPA5Q8WXQ8 436 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 CPNE1Q99829 537 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 TMEM27Q9HBJ8 222 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 GULP1Q9UBP9 304 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 PCDHGB6Q9Y5F9 930 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SPIN1Q9Y657 262 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ILVBLA1L0T0 632 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF726A6NNF4 738 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 PITPNM1O00562 1244 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 CCNE2O96020 404 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ASGR1P07306 291 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 HCKP08631 526 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ETS1P14921 441 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 PGAM2P15259 253 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 GP5P40197 560 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 PGDP52209 483 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 MAZP56270 477 aaKnown RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 RAB31Q13636 194 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 PLEKHG4Q58EX7 1191 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SMYD5Q6GMV2 418 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 RAET1GQ6H3X3 334 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 PARGQ86W56 976 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ZC3H7AQ8IWR0 971 aaKnown RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 GORASP1Q9BQQ3 440 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF700Q9H0M5 742 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ASAH2Q9NR71 780 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 MAT2BQ9NZL9 334 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 IKZF2Q9UKS7 526 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 HEBP2Q9Y5Z4 205 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 NKRFO15226 690 aaKnown RBP eCLIP6.01□□□□□ -1.45
SCN1A-212ENST00000636194 FGBP02675 491 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 AVPR1BP47901 424 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 SLC6A9P48067 706 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 CEBPAP49715 358 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-212ENST00000636194 MTMR2Q13614 643 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 SMTNL2Q2TAL5 461 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 EFCAB3Q8N7B9 438 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 ING5Q8WYH8 240 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 CNOT9Q92600 299 aaKnown RBP6.01□□□□□ -1.45
SCN1A-212ENST00000636194 DDX47Q9H0S4 455 aaKnown RBP6.01□□□□□ -1.45
SCN1A-212ENST00000636194 PIF1Q9H611 641 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 RMI1Q9H9A7 625 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 CLIC5Q9NZA1 410 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 KIAA0232Q92628 1395 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 PEX12O00623 359 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 LINGO3P0C6S8 592 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 CBSLP0DN79 551 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 IFNGR1P15260 489 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 SLC7A1P30825 629 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 CBSP35520 551 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 CD151P48509 253 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF211Q13398 564 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-212ENST00000636194 TIGD6Q17RP2 521 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 ZFP69Q49AA0 526 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 EIPR1Q53HC9 387 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 ZDHHC20Q5W0Z9 365 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 MON1BQ7L1V2 547 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 ALDH16A1Q8IZ83 802 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 RASGEF1CQ8N431 466 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 PDPRQ8NCN5 879 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 PPP1R13LQ8WUF5 828 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 AP2M1Q96CW1 435 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 BPIFA2Q96DR5 249 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF649Q9BS31 505 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms