RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 VWA5B1Q5TIE3 1220 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 ISCA2Q86U28 154 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 PIM3Q86V86 326 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 ARHGAP24Q8N264 748 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 CCNYL1Q8N7R7 359 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 EFHBQ8N7U6 833 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 SHKBP1Q8TBC3 707 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 HERVK_113Q902F9 699 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 BHMTQ93088 406 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 LMLNQ96KR4 655 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 CCDC68Q9H2F9 335 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 SYTL2Q9HCH5 934 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 ZDHHC2Q9UIJ5 367 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 FKBPLQ9UIM3 349 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 ZNF711Q9Y462 761 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 PCDHB9Q9Y5E1 797 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 SLC4A7Q9Y6M7 1214 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 KIAA0100Q14667 2235 aaKnown RBP22.02■■□□□ 1.12
PNKP-220ENST00000627232 HIDE1A8MVS5 230 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 B2RBV5 119 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 GRID2O43424 1007 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 TLL1O43897 1013 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 SOCS5O75159 536 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 ZNF37AP17032 561 aaPredicted RBP22.02■■□□□ 1.12
PNKP-220ENST00000627232 PRDX6P30041 224 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 MC4RP32245 332 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 MNAT1P51948 309 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 NFKB2Q00653 900 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 GALNT1Q10472 559 aaPredicted RBP22.02■■□□□ 1.12
PNKP-220ENST00000627232 PDAP1Q13442 181 aaKnown RBP22.02■■□□□ 1.12
PNKP-220ENST00000627232 SLC9B1Q4ZJI4 515 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 ARHGAP15Q53QZ3 475 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 AARS2Q5JTZ9 985 aaKnown RBP22.02■■□□□ 1.12
PNKP-220ENST00000627232 TPGS1Q6ZTW0 290 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 UBE2Q1Q7Z7E8 422 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 KIRREL3Q8IZU9 778 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 CMTM8Q8IZV2 173 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 TTC16Q8NEE8 873 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 SPPL3Q8TCT6 385 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 MAPK15Q8TD08 544 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 SH3RF2Q8TEC5 729 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 PIH1D2Q8WWB5 315 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 SMIM14Q96QK8 99 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 CCDC28BQ9BUN5 200 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 C1orf21Q9H246 121 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 EML4Q9HC35 981 aaKnown RBP22.02■■□□□ 1.12
PNKP-220ENST00000627232 TCF7L2Q9NQB0 619 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 TLR9Q9NR96 1032 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 TAS2R13Q9NYV9 303 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 COMMD10Q9Y6G5 202 aa22.02■■□□□ 1.12
PNKP-220ENST00000627232 UBA6A0AVT1 1052 aaPredicted RBP22.01■■□□□ 1.11
PNKP-220ENST00000627232 K7ERQ8 282 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 HTRA2O43464 458 aaPredicted RBP22.01■■□□□ 1.11
PNKP-220ENST00000627232 IGSF6O95976 241 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 CCND1P24385 295 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 HOXA9P31269 272 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 CCR2P41597 374 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 CCR10P46092 362 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 LEMD2Q8NC56 503 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 RHEBL1Q8TAI7 183 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 POF1BQ8WVV4 589 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 L3HYPDHQ96EM0 354 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 FAR2Q96K12 515 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 TFB2MQ9H5Q4 396 aaKnown RBP22.01■■□□□ 1.11
PNKP-220ENST00000627232 PLK2Q9NYY3 685 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 IL17CQ9P0M4 197 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 CLEC4EQ9ULY5 219 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 PKP3Q9Y446 797 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 ZNF106Q9H2Y7 1883 aaKnown RBP22.01■■□□□ 1.11
PNKP-220ENST00000627232 LCHNA4D1U4 455 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 SMAD6O43541 496 aaKnown RBP22.01■■□□□ 1.11
PNKP-220ENST00000627232 SMIM24O75264 130 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 SRP72O76094 671 aaKnown RBP22.01■■□□□ 1.11
PNKP-220ENST00000627232 RHOBTB1O94844 696 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 PRSS56P0CW18 603 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 IMPDH1P20839 514 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 CD70P32970 193 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 HMGCLP35914 325 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 BCL2L1Q07817 233 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 PEX6Q13608 980 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 DNAL1Q4LDG9 190 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 ACAD11Q709F0 780 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 KDM1BQ8NB78 822 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 MCUR1Q96AQ8 359 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 MOCOSQ96EN8 888 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 TRMOQ9BU70 441 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 TM6SF2Q9BZW4 377 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 ALG9Q9H6U8 611 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 HCFC1R1Q9NWW0 138 aa22.01■■□□□ 1.11
PNKP-220ENST00000627232 EVLQ9UI08 416 aaPredicted RBP22.01■■□□□ 1.11
PNKP-220ENST00000627232 NEMP2A6NFY4 417 aa22■■□□□ 1.11
PNKP-220ENST00000627232 TRPC5OSA6NMA1 111 aa22■■□□□ 1.11
PNKP-220ENST00000627232 ZBTB14O43829 449 aa22■■□□□ 1.11
PNKP-220ENST00000627232 MAGEC1O60732 1142 aa22■■□□□ 1.11
PNKP-220ENST00000627232 PYGLP06737 847 aa22■■□□□ 1.11
PNKP-220ENST00000627232 KCNA5P22460 613 aa22■■□□□ 1.11
PNKP-220ENST00000627232 FMO4P31512 558 aa22■■□□□ 1.11
PNKP-220ENST00000627232 ADARP55265 1226 aaKnown RBP22■■□□□ 1.11
PNKP-220ENST00000627232 KDSRQ06136 332 aa22■■□□□ 1.11
PNKP-220ENST00000627232 PITRM1Q5JRX3 1037 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms