RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 KRT10P13645 584 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 GLB1P16278 677 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 RBMS1P29558 406 aaKnown RBP13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 SLC5A2P31639 672 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 MMP13P45452 471 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 ARSDP51689 593 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 INHBCP55103 352 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 CDH6P55285 790 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 TMPRSS3P57727 454 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 CDK3Q00526 305 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 PTSQ03393 145 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 NIPAL4Q0D2K0 466 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 MARC1Q5VT66 337 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 KIAA1614Q5VZ46 1190 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 ALG1LQ6GMV1 187 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 INO80CQ6PI98 192 aaPredicted RBP13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 RAB11FIP2Q7L804 512 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 CCNJLQ8IV13 435 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 ATPAF2Q8N5M1 289 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 PQLC3Q8N755 202 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 LSM14AQ8ND56 463 aaKnown RBP13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 ARRDC2Q8TBH0 407 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 SCG3Q8WXD2 468 aaKnown RBP13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 MAML1Q92585 1016 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 SCAMP4Q969E2 229 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 WDR24Q96S15 920 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 ABCG8Q9H221 673 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 SEMA6CQ9H3T2 930 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 SUDS3Q9H7L9 328 aaPredicted RBP13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 CARS2Q9HA77 564 aaKnown RBP13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 NT5MQ9NPB1 228 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 LRIT1Q9P2V4 623 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 CD84Q9UIB8 345 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 PHTF1Q9UMS5 762 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 SUFUQ9UMX1 484 aa13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 ZFC3H1O60293 1989 aaKnown RBP13.51□□□□□ -0.25
SOX2-OT-241ENST00000626948 CCNB1P14635 433 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 HSPA9P38646 679 aaKnown RBP13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 GARSP41250 739 aaKnown RBP13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 UBASH3AP57075 661 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 ZBED6P86452 979 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 DSC2Q02487 901 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 CFHR1Q03591 330 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 VAC14Q08AM6 782 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 GALNT2Q10471 571 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 LY6DQ14210 128 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 PAFAH1B3Q15102 231 aaKnown RBP13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 ASTE1Q2TB18 679 aaPredicted RBP13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 ALKBH5Q6P6C2 394 aaKnown RBP13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 TRIM74Q86UV6 250 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 NAGSQ8N159 534 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 FBXO39Q8N4B4 442 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 ARL14Q8N4G2 192 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 ATL2Q8NHH9 583 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 FAF2Q96CS3 445 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 SCARF2Q96GP6 870 aaPredicted RBP13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 SEMA3CQ99985 751 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 DPEP2Q9H4A9 486 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 RDH14Q9HBH5 336 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 TAAR2Q9P1P5 351 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 IP6K2Q9UHH9 426 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 MOSPD1Q9UJG1 213 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 SLC17A4Q9Y2C5 497 aa13.5□□□□□ -0.25
SOX2-OT-241ENST00000626948 SETXQ7Z333 2677 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 ERVH48-1M5A8F1 160 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 PPM1DO15297 605 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 NUDT21O43809 227 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 ECEL1O95672 775 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 EML2O95834 649 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 MMP2P08253 660 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 PNLIPP16233 465 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 WT1P19544 449 aaPredicted RBP13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 KELP23276 732 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 CASP14P31944 242 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 GNPDA1P46926 289 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 OR1D5P58170 312 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 CTBSQ01459 385 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 GBE1Q04446 702 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 DPTQ07507 201 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 NR1D2Q14995 579 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 C16orf72Q14CZ0 275 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 CCDC122Q5T0U0 273 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 ARMC12Q5T9G4 340 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 LRRC66Q68CR7 880 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 ZNF438Q7Z4V0 828 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 PMEPA1Q969W9 287 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 NUDT22Q9BRQ3 303 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 FOXJ2Q9P0K8 574 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 IFNKQ9P0W0 207 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 RCOR3Q9P2K3 495 aaPredicted RBP13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 ACSL6Q9UKU0 697 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 CNOT6Q9ULM6 557 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 TMEM98Q9Y2Y6 226 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 LOXL2Q9Y4K0 774 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 PCDHGA7Q9Y5G6 932 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 BZW2Q9Y6E2 419 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 COL6A6A6NMZ7 2263 aa13.49□□□□□ -0.25
SOX2-OT-241ENST00000626948 SDK2Q58EX2 2172 aa13.48□□□□□ -0.25
SOX2-OT-241ENST00000626948 PRAMEF33A0A0G2JMD5 474 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms