RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 FAM122CQ6P4D5 195 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 KCTD18Q6PI47 426 aaPredicted RBP3.32□□□□□ -1.88
VBP1-204ENST00000625964 UNQ6126/PRO20091Q6UXV3 157 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 HAPLN4Q86UW8 402 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 SFR1Q86XK3 245 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 FOXRED2Q8IWF2 684 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 SPATA6LQ8N4H0 392 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 TSPYL6Q8N831 410 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 ZNF441Q8N8Z8 693 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 GTF3C6Q969F1 213 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 TMEM19Q96HH6 336 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 METTL2AQ96IZ6 378 aaKnown RBP3.32□□□□□ -1.88
VBP1-204ENST00000625964 NR1H4Q96RI1 486 aaPredicted RBP3.32□□□□□ -1.88
VBP1-204ENST00000625964 SEC62Q99442 399 aaKnown RBP3.32□□□□□ -1.88
VBP1-204ENST00000625964 FAM110AQ9BQ89 295 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 IFIH1Q9BYX4 1025 aaKnown RBP3.32□□□□□ -1.88
VBP1-204ENST00000625964 PPP1R3EQ9H7J1 279 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 BRF2Q9HAW0 419 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 PREBQ9HCU5 417 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 TAS2R10Q9NYW0 307 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 C1RLQ9NZP8 487 aa3.32□□□□□ -1.88
VBP1-204ENST00000625964 TTC7AQ9ULT0 858 aaPredicted RBP3.32□□□□□ -1.88
VBP1-204ENST00000625964 IGHV4OR15-8A0A075B7B6 117 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 A0A0G2JPF8 293 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 CCDC189A1A4V9 331 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 EIF3CLB5ME19 914 aaKnown RBP3.31□□□□□ -1.88
VBP1-204ENST00000625964 HNRNPCL3B7ZW38 293 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 PRAC2D3DTV9 90 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 TULP2O00295 520 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 CREB3O43889 395 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 HNRNPCL1O60812 293 aaKnown RBP3.31□□□□□ -1.88
VBP1-204ENST00000625964 HNRNPCL4P0DMR1 293 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 DDX5P17844 614 aaKnown RBP3.31□□□□□ -1.88
VBP1-204ENST00000625964 BDKRB2P30411 391 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 METAP2P50579 478 aaKnown RBP eCLIP3.31□□□□□ -1.88
VBP1-204ENST00000625964 CLCNKAP51800 687 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 RARSP54136 660 aaKnown RBP3.31□□□□□ -1.88
VBP1-204ENST00000625964 RAD23BP54727 409 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 BRWD1-AS2P59051 145 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 POU5F1BQ06416 359 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 ZBTB17Q13105 803 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 DRAP1Q14919 205 aaPredicted RBP3.31□□□□□ -1.88
VBP1-204ENST00000625964 GGNBP1Q5YKI7 109 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 CDC73Q6P1J9 531 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 ATF7IPQ6VMQ6 1270 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 MMS22LQ6ZRQ5 1243 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 CCDC13Q8IYE1 715 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 RFLNBQ8N5W9 214 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 POC1AQ8NBT0 407 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 METTL6Q8TCB7 284 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 FIG4Q92562 907 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 SLC41A2Q96JW4 573 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 PKP4Q99569 1192 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 PIP5K1AQ99755 562 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 USP44Q9H0E7 712 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 KCNN2Q9H2S1 579 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 PRKRIP1Q9H875 184 aaPredicted RBP3.31□□□□□ -1.88
VBP1-204ENST00000625964 JMJD4Q9H9V9 463 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 KIF9Q9HAQ2 790 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 DONSONQ9NYP3 566 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 HAO1Q9UJM8 370 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 INTS6Q9UL03 887 aaKnown RBP3.31□□□□□ -1.88
VBP1-204ENST00000625964 CEPT1Q9Y6K0 416 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 CAPN7Q9Y6W3 813 aa3.31□□□□□ -1.88
VBP1-204ENST00000625964 A0A1W2PPH5 198 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 AKR1B15C9JRZ8 316 aaPredicted RBP3.3□□□□□ -1.88
VBP1-204ENST00000625964 VCYO14598 125 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 FTCDO95954 541 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 UBL4AP11441 157 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 DGKAP23743 735 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 RRM1P23921 792 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 DDIT3P35638 169 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 TMPOP42166 694 aaKnown RBP3.3□□□□□ -1.88
VBP1-204ENST00000625964 CASP6P55212 293 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 USP41Q3LFD5 358 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 C6orf141Q5SZD1 244 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 CEP85LQ5SZL2 805 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 INO80CQ6PI98 192 aaPredicted RBP3.3□□□□□ -1.88
VBP1-204ENST00000625964 PQLC2Q6ZP29 291 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 TUBA1AQ71U36 451 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 GSTA5Q7RTV2 222 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 R3HCC1LQ7Z5L2 792 aaKnown RBP3.3□□□□□ -1.88
VBP1-204ENST00000625964 EXOC3L1Q86VI1 746 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 WDR63Q8IWG1 891 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 ODF3L1Q8IXM7 274 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 NAGSQ8N159 534 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 KCNH5Q8NCM2 988 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 OR2AK2Q8NG84 335 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 SPATA22Q8NHS9 363 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 SORCS1Q8WY21 1168 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 SH3GL2Q99962 352 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 TUBA1CQ9BQE3 449 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 TMEM47Q9BQJ4 181 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 UBTD1Q9HAC8 227 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 LRRC4Q9HBW1 653 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 ASAH2Q9NR71 780 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 PGAP2Q9UHJ9 254 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 CKAP5Q14008 2032 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 KDM3AQ9Y4C1 1321 aa3.3□□□□□ -1.88
VBP1-204ENST00000625964 SEC14L2O76054 403 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms