RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 NCANO14594 1321 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 COL4A1P02462 1669 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 COL24A1Q17RW2 1714 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 PLK4O00444 970 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 TYRP1P17643 537 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 SEPHS1P49903 392 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 MAPK10P53779 464 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 CACNA2D1P54289 1103 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 TRADDQ15628 312 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 DPYSL2Q16555 572 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 TRIM74Q86UV6 250 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 RASGRP3Q8IV61 690 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 PPWD1Q96BP3 646 aaKnown RBP9.08□□□□□ -0.96
HDAC9-229ENST00000622668 PAFAH2Q99487 392 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 GDF15Q99988 308 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 WHRNQ9P202 907 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 KCNE2Q9Y6J6 123 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 CDK5RAP2Q96SN8 1893 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 CACNA1EQ15878 2313 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 A0A096LPK6 155 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 MUSKO15146 869 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 DDX3YO15523 660 aaKnown RBP9.08□□□□□ -0.96
HDAC9-229ENST00000622668 ZNF8P17098 575 aaPredicted RBP9.08□□□□□ -0.96
HDAC9-229ENST00000622668 CDKN2BP42772 138 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 SELENONQ9NZV5 590 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 APOBEC3BQ9UH17 382 aaKnown RBP9.08□□□□□ -0.96
HDAC9-229ENST00000622668 TMEM98Q9Y2Y6 226 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 CFAP20Q9Y6A4 193 aaKnown RBP9.08□□□□□ -0.96
HDAC9-229ENST00000622668 CLDN7O95471 211 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 THEGLP0DJG4 465 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 SRFP11831 508 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 TFE3P19532 575 aaPredicted RBP9.08□□□□□ -0.96
HDAC9-229ENST00000622668 RASSF2P50749 326 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 PAGE2BQ5JRK9 111 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 LYSMD3Q7Z3D4 306 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 SCD5Q86SK9 330 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 LINC01465Q8N7H1 131 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 TEKT5Q96M29 485 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 RAB3IPQ96QF0 476 aaPredicted RBP9.08□□□□□ -0.96
HDAC9-229ENST00000622668 RXFP1Q9HBX9 757 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 BCAP29Q9UHQ4 241 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 RECQL5O94762 991 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-229ENST00000622668 HOXA9P31269 272 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 CLCN6P51797 869 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 CLCNKAP51800 687 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 ZNF805Q5CZA5 627 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 CERS6Q6ZMG9 384 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 USP53Q70EK8 1073 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 SERPINA9Q86WD7 417 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 BCAS4Q8TDM0 211 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 BCL7CQ8WUZ0 217 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-229ENST00000622668 SDCCAG3Q96C92 435 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 CERS2Q96G23 380 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 CDC42EP4Q9H3Q1 356 aaKnown RBP9.07□□□□□ -0.96
HDAC9-229ENST00000622668 SH3BP4Q9P0V3 963 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 PCDHB3Q9Y5E6 796 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 IGLON5A6NGN9 336 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 NPC1O15118 1278 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 AVILO75366 819 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 C5AR1P21730 350 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 ELOCQ15369 112 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 NR6A1Q15406 480 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 TRIM61Q5EBN2 209 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 EGFLAMQ63HQ2 1017 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 C17orf64Q86WR6 236 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 OR52K2Q8NGK3 314 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 METTL6Q8TCB7 284 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 CHFRQ96EP1 664 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 ZNF599Q96NL3 588 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 FAM111AQ96PZ2 611 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 NMRAL1Q9HBL8 299 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 SYBUQ9NX95 663 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-229ENST00000622668 MYH7P12883 1935 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 MCM3APO60318 1980 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 PIAS1O75925 651 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 HLA-DQB2P05538 268 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 CCDC166P0CW27 439 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 PFKLP17858 780 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 IL1R2P27930 398 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 VIPR1P32241 457 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 HNRNPKP61978 463 aaKnown RBP eCLIP9.07□□□□□ -0.96
HDAC9-229ENST00000622668 DMWDQ09019 674 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 C1orf220Q5T0J3 134 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 CNPY4Q8N129 248 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 KRT78Q8N1N4 520 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 NKAPQ8N5F7 415 aaKnown RBP9.07□□□□□ -0.96
HDAC9-229ENST00000622668 TMCO5AQ8N6Q1 288 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 STYXQ8WUJ0 223 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 EDAQ92838 391 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 VMP1Q96GC9 406 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 ASB16Q96NS5 453 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 IRF2BPLQ9H1B7 796 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 CHRAC1Q9NRG0 131 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 DMGDHQ9UI17 866 aaKnown RBP9.07□□□□□ -0.96
HDAC9-229ENST00000622668 TRIM33Q9UPN9 1127 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 ZNF711Q9Y462 761 aa9.07□□□□□ -0.96
HDAC9-229ENST00000622668 ATXN2Q99700 1313 aaKnown RBP9.07□□□□□ -0.96
HDAC9-229ENST00000622668 A0A0U1RQJ8 604 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 URADA6NGE7 173 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms