RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 NOL11Q9H8H0 719 aaKnown RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 IL1RL2Q9HB29 575 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 OXSMQ9NWU1 459 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 GID8Q9NWU2 228 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 DDIT4Q9NX09 232 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 XPR1Q9UBH6 696 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 PCDHB5Q9Y5E4 795 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 A0A1W2PRU2 124 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 KCNU1A8MYU2 1149 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 CXCL10P02778 98 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 LTFP02788 710 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 TPH1P17752 444 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 MAGEA8P43361 318 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 PTPN9P43378 593 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 NPY2RP49146 381 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 DAOAP59103 153 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 NAA20P61599 178 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 ZBTB17Q13105 803 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 PLA2G4EQ3MJ16 856 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 MTX3Q5HYI7 312 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 FAM171BQ6P995 826 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 PRSS55Q6UWB4 352 aaPredicted RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 ZNF534Q76KX8 674 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 ALDH16A1Q8IZ83 802 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 PLD6Q8N2A8 252 aaKnown RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 METTL25Q8N6Q8 603 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 HM13Q8TCT9 377 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 MAPK15Q8TD08 544 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 IRGQQ8WZA9 623 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 LPGAT1Q92604 370 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 SDCCAG3Q96C92 435 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 VPS50Q96JG6 964 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 AGAP2Q99490 1192 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 TTPALQ9BTX7 342 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 UNKQ9C0B0 810 aaKnown RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 LIN28AQ9H9Z2 209 aaKnown RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 CYP4F12Q9HCS2 524 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 RIMS3Q9UJD0 308 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 FBXO9Q9UK97 447 aaPredicted RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 NUDT5Q9UKK9 219 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 TDRKHQ9Y2W6 561 aaKnown RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 ABHD14A-ACY1A0A1B0GW23 586 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 ERI2A8K979 691 aaKnown RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 ZNF487B1APH4 448 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 INPPL1O15357 1258 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 OAZ2O95190 189 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 IL4RP24394 825 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 FASP25445 335 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC5A2P31639 672 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 GMPRP36959 345 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 GRIA3P42263 894 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 MAGEA3P43357 314 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 TMED10P49755 219 aaKnown RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 PSMD7P51665 324 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 OCA2Q04671 838 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 RALGDSQ12967 914 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 GK3PQ14409 553 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 SQLEQ14534 574 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 TAF12Q16514 161 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 FAM83EQ2M2I3 478 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 KCTD21Q4G0X4 260 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 CCDC92Q53HC0 331 aaPredicted RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 NCBP2-AS2Q69YL0 99 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 PIWIL4Q7Z3Z4 852 aaKnown RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 RAB44Q7Z6P3 723 aaPredicted RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 LINC00523Q86TU6 105 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 TMEM173Q86WV6 379 aaPredicted RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 LILRB2Q8N423 598 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 PPHLN1Q8NEY8 458 aaKnown RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 FNDC8Q8TC99 324 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 BORCS5Q969J3 196 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 CCDC126Q96EE4 140 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 CCDC138Q96M89 665 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 TCF12Q99081 682 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 IL22Q9GZX6 179 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 TMEM165Q9HC07 324 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 ZBTB26Q9HCK0 441 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 TMEM30AQ9NV96 361 aa7□□□□□ -1.29
SRGAP3-213ENST00000618999 WARS2Q9UGM6 360 aaKnown RBP7□□□□□ -1.29
SRGAP3-213ENST00000618999 H7C4K7 107 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 TMEM189-UBE2V1I3L0A0 370 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 CLOCKO15516 846 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 PSMD3O43242 534 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 FZD6O60353 706 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 RNASEH2AO75792 299 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 TIMP1P01033 207 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 SNRPB2P08579 225 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 PIM1P11309 404 aaPredicted RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 RPL17P18621 184 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 GLDCP23378 1020 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 ARL1P40616 181 aaPredicted RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 TUBA4AP68366 448 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 PITX1P78337 314 aaPredicted RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 CDKL1Q00532 357 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 CDH17Q12864 832 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 ATP1A4Q13733 1029 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC25A52Q3SY17 297 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 KLHL35Q6PF15 583 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 PAOXQ6QHF9 649 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 ZNF567Q8N184 647 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms