RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 PIPSLA2A3N6 862 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 TULP3O75386 442 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CCNB2O95067 398 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SLC7A1P30825 629 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 AIF1P55008 147 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 AFTPHQ6ULP2 937 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 NPNTQ6UXI9 565 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 EPHX4Q8IUS5 362 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 FBXO16Q8IX29 292 aaPredicted RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 TEX19Q8NA77 164 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 IPCEF1Q8WWN9 437 aaPredicted RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 LPGAT1Q92604 370 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 BBS4Q96RK4 519 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 FAIM2Q9BWQ8 316 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SLC39A8Q9C0K1 460 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SNX15Q9NRS6 342 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ZNF510Q9Y2H8 683 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 MAFBQ9Y5Q3 323 aaPredicted RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 FRMPD1Q5SYB0 1578 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 TRIM43BA6NCK2 446 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CST1P01037 141 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CYP2A6P11509 494 aaPredicted RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 HGFP14210 728 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 GM2AP17900 193 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 TLX1P31314 330 aaPredicted RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 CDK9P50750 372 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 MAPKAPK3Q16644 382 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 PPM1JQ5JR12 505 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 OVOS1Q6IE37 1185 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 KRT77Q7Z794 578 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 DNAJB8Q8NHS0 232 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SMAD5Q99717 465 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 EPB41L1Q9H4G0 881 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ANKHQ9HCJ1 492 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 KCTD5Q9NXV2 234 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SLC7A8Q9UHI5 535 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 DNMT3LQ9UJW3 386 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CRYL1Q9Y2S2 319 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 FADS3Q9Y5Q0 445 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 KBTBD13C9JR72 458 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CPB1P15086 417 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 GLRBP48167 497 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 TUFMP49411 452 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 CCR3P51677 355 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 DNAJB13P59910 316 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 UBE3AQ05086 875 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ATP1A4Q13733 1029 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SIM2Q14190 667 aaPredicted RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 C15orf59Q2T9L4 293 aaPredicted RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 PDCD4Q53EL6 469 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 ATAD3BQ5T9A4 648 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 TRIM40Q6P9F5 258 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ITIH5Q86UX2 942 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SPATA6LQ8N4H0 392 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CLEC4DQ8WXI8 215 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CPT1BQ92523 772 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SPATA5L1Q9BVQ7 753 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 FAM126AQ9BYI3 521 aaPredicted RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 NLNQ9BYT8 704 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ELOVL4Q9GZR5 314 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 FN3KQ9H479 309 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 RPS6KB2Q9UBS0 482 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 GNPTGQ9UJJ9 305 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SYNDIG1LA6NDD5 238 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 BTN3A3O00478 584 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SCELO95171 688 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 LDOC1O95751 146 aaPredicted RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 TCF4P15884 667 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SLC6A2P23975 617 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ECHS1P30084 290 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 MTHFRP42898 656 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 RPS9P46781 194 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 TTPAP49638 278 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SRSF11Q05519 484 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 UBE2Q1Q7Z7E8 422 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 RTL3Q8N8U3 475 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 UTP15Q8TED0 518 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 SERPINB11Q96P15 392 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 TSEN34Q9BSV6 310 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 POLR1EQ9GZS1 481 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 GLOD4Q9HC38 313 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 H3BRB1 525 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CSDE1O75534 798 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 SPIDRQ14159 915 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 BHLHB9Q6PI77 547 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 PRR23CQ6ZRP0 262 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 KIAA0408Q6ZU52 694 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 FGD2Q7Z6J4 655 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ZNF467Q7Z7K2 595 aaPredicted RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 PEX5LQ8IYB4 626 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 FAM45AQ8TCE6 357 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 COPS5Q92905 334 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SLC9A7Q96T83 725 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ACE2Q9BYF1 805 aaPredicted RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 COQ10BQ9H8M1 238 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 TSPAN16Q9UKR8 245 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 RIF1Q5UIP0 2472 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 FAM234BA2RU67 622 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 OR6C75A6NL08 312 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ANXA5P08758 320 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms