RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 APCDD1Q8J025 514 aa25.38■■□□□ 1.65
VEGFC-202ENST00000618562 FSTL5Q8N475 847 aaPredicted RBP25.38■■□□□ 1.65
VEGFC-202ENST00000618562 DCAF4L2Q8NA75 395 aa25.38■■□□□ 1.65
VEGFC-202ENST00000618562 C2CD4AQ8NCU7 369 aaPredicted RBP25.38■■□□□ 1.65
VEGFC-202ENST00000618562 FAM136AQ96C01 138 aa25.38■■□□□ 1.65
VEGFC-202ENST00000618562 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.38■■□□□ 1.65
VEGFC-202ENST00000618562 VTI1BQ9UEU0 232 aa25.38■■□□□ 1.65
VEGFC-202ENST00000618562 E9PBE3 544 aa25.37■■□□□ 1.65
VEGFC-202ENST00000618562 KLHL41O60662 606 aa25.37■■□□□ 1.65
VEGFC-202ENST00000618562 NDST3O95803 873 aa25.37■■□□□ 1.65
VEGFC-202ENST00000618562 MPSTP25325 297 aa25.37■■□□□ 1.65
VEGFC-202ENST00000618562 DDX6P26196 483 aaKnown RBP eCLIP25.37■■□□□ 1.65
VEGFC-202ENST00000618562 AVPR1AP37288 418 aa25.37■■□□□ 1.65
VEGFC-202ENST00000618562 NTHL1P78549 312 aa25.37■■□□□ 1.65
VEGFC-202ENST00000618562 KLC1Q07866 573 aa25.37■■□□□ 1.65
VEGFC-202ENST00000618562 INO80DQ53TQ3 878 aaPredicted RBP25.37■■□□□ 1.65
VEGFC-202ENST00000618562 SEL1L3Q68CR1 1132 aa25.37■■□□□ 1.65
VEGFC-202ENST00000618562 IRGCQ6NXR0 463 aa25.37■■□□□ 1.65
VEGFC-202ENST00000618562 CNDP1Q96KN2 507 aa25.37■■□□□ 1.65
VEGFC-202ENST00000618562 NDE1Q9NXR1 346 aa25.37■■□□□ 1.65
VEGFC-202ENST00000618562 LHX3Q9UBR4 397 aa25.37■■□□□ 1.65
VEGFC-202ENST00000618562 SLC22A2O15244 555 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 CHRNGP07510 517 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 HNRNPA1P09651 372 aaKnown RBP eCLIP25.36■■□□□ 1.65
VEGFC-202ENST00000618562 SLC1A2P43004 574 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 CD151P48509 253 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 KPNA2P52292 529 aaKnown RBP25.36■■□□□ 1.65
VEGFC-202ENST00000618562 RALGPS1Q5JS13 557 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 ZNF697Q5TEC3 545 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 KIAA0408Q6ZU52 694 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 PLCD3Q8N3E9 789 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 JADE3Q92613 823 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 ZNF184Q99676 751 aaPredicted RBP25.36■■□□□ 1.65
VEGFC-202ENST00000618562 RTKNQ9BST9 563 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 CDH22Q9UJ99 828 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 KCTD3Q9Y597 815 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 MYOFQ9NZM1 2061 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 RANBP2P49792 3224 aaKnown RBP25.36■■□□□ 1.65
VEGFC-202ENST00000618562 A0A087X1B8 175 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 SNUPNO95149 360 aaKnown RBP25.36■■□□□ 1.65
VEGFC-202ENST00000618562 ITGAXP20702 1163 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 CES1P23141 567 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 ARL13AQ5H913 290 aaPredicted RBP25.36■■□□□ 1.65
VEGFC-202ENST00000618562 ZNF470Q6ECI4 717 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 FRMD7Q6ZUT3 714 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 BLOC1S5Q8TDH9 187 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 PDCD6IPQ8WUM4 868 aaKnown RBP25.36■■□□□ 1.65
VEGFC-202ENST00000618562 USP13Q92995 863 aaPredicted RBP25.36■■□□□ 1.65
VEGFC-202ENST00000618562 GPR78Q96P69 363 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 OR52B2Q96RD2 323 aa25.36■■□□□ 1.65
VEGFC-202ENST00000618562 TDRD1Q9BXT4 1180 aaKnown RBP25.36■■□□□ 1.65
VEGFC-202ENST00000618562 PIGNO95427 931 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 MT-CO1P00395 513 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 PRLP01236 227 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 GLRBP48167 497 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 PRSS36Q5K4E3 855 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 NEPROQ6NW34 567 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 CEP97Q8IW35 865 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 MFSD6LQ8IWD5 586 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 XPR1Q9UBH6 696 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 FCF1Q9Y324 198 aaKnown RBP25.35■■□□□ 1.65
VEGFC-202ENST00000618562 ATG2AQ2TAZ0 1938 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 PIRTP0C851 137 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 ARSDP51689 593 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 NAGLUP54802 743 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 POU4F1Q01851 419 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 LMAN2Q12907 356 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 CUL3Q13618 768 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 ARHGAP15Q53QZ3 475 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 GABPB2Q8TAK5 448 aaPredicted RBP25.35■■□□□ 1.65
VEGFC-202ENST00000618562 MRPL46Q9H2W6 279 aaKnown RBP25.35■■□□□ 1.65
VEGFC-202ENST00000618562 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.35■■□□□ 1.65
VEGFC-202ENST00000618562 FBXO5Q9UKT4 447 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 HCFC2Q9Y5Z7 792 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 ARL5AQ9Y689 179 aa25.35■■□□□ 1.65
VEGFC-202ENST00000618562 A6NHS1 94 aa25.34■■□□□ 1.65
VEGFC-202ENST00000618562 CCL22O00626 93 aa25.34■■□□□ 1.65
VEGFC-202ENST00000618562 XYLBO75191 536 aa25.34■■□□□ 1.65
VEGFC-202ENST00000618562 SHHQ15465 462 aa25.34■■□□□ 1.65
VEGFC-202ENST00000618562 DEFB107AQ8IZN7 70 aa25.34■■□□□ 1.65
VEGFC-202ENST00000618562 FIBINQ8TAL6 211 aa25.34■■□□□ 1.65
VEGFC-202ENST00000618562 AGR3Q8TD06 166 aa25.34■■□□□ 1.65
VEGFC-202ENST00000618562 PCDHGC4Q9Y5F7 938 aa25.34■■□□□ 1.65
VEGFC-202ENST00000618562 CDH23Q9H251 3354 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 K7ERQ8 282 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 DLX3O60479 287 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 PRAMEF12O95522 483 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 PDHA1P08559 390 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 TFEBP19484 476 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 ADSLP30566 484 aaPredicted RBP25.33■■□□□ 1.65
VEGFC-202ENST00000618562 NSUN2Q08J23 767 aaKnown RBP eCLIP25.33■■□□□ 1.65
VEGFC-202ENST00000618562 GPM6BQ13491 265 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 ACAD11Q709F0 780 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 GRASPQ7Z6J2 395 aaPredicted RBP25.33■■□□□ 1.65
VEGFC-202ENST00000618562 RBM23Q86U06 439 aaKnown RBP25.33■■□□□ 1.65
VEGFC-202ENST00000618562 LEMD2Q8NC56 503 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 CALML6Q8TD86 181 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 BRSK1Q8TDC3 778 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 ELMO2Q96JJ3 720 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 MRPL57Q9BQC6 102 aaKnown RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms