RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CETN1Q12798 172 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 UGP2Q16851 508 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 AGAP9Q5VTM2 703 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 FAM183BPQ6ZVS7 135 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 SLC9B2Q86UD5 537 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 MCEMP1Q8IX19 187 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 NRSN1Q8IZ57 195 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 PDILTQ8N807 584 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 EHBP1Q8NDI1 1231 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 OR7D4Q8NG98 312 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 CT55Q8WUE5 264 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 NACC2Q96BF6 587 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 STAMBPL1Q96FJ0 436 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 OR2M4Q96R27 311 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 CD180Q99467 661 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 TSG101Q99816 390 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 DPH2Q9BQC3 489 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 TRIM8Q9BZR9 551 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 TKTL2Q9H0I9 626 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 TMEM168Q9H0V1 697 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 CXXC4Q9H2H0 198 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 SUV39H2Q9H5I1 410 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 FCF1Q9Y324 198 aaKnown RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 OTOGQ6ZRI0 2925 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 GTPBP10A4D1E9 387 aaKnown RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 PPM1DO15297 605 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 NDUFA10O95299 355 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 LSM8O95777 96 aaKnown RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 GNA14O95837 355 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 UGT2B4P06133 528 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 CCNYL3P0C7X3 344 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 PRKAR1AP10644 381 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 F8A1P23610 371 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 HSPA9P38646 679 aaKnown RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 GSDMDP57764 484 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 POLR2LP62875 67 aaKnown RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 NR6A1Q15406 480 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 ZXDCQ2QGD7 858 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 LIPIQ6XZB0 460 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 UMODL1-AS1Q8N2C9 162 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 WDTC1Q8N5D0 677 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 TMEM102Q8N9M5 508 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 CENPIQ92674 756 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 DTD2Q96FN9 168 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 SYTL2Q9HCH5 934 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 LHX9Q9NQ69 397 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 ANLNQ9NQW6 1124 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 ENAMQ9NRM1 1142 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 NFKBIL1Q9UBC1 381 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 RCOR1Q9UKL0 485 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 DAAM1Q9Y4D1 1078 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 MYO9AB2RTY4 2548 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 A0A0U1RQS6 177 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 RGSL1A5PLK6 1076 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 ANKUB1A6NFN9 424 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 RASA4BC9J798 803 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 POLR1CO15160 346 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 FGF10O15520 208 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 RASA4O43374 803 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 PCCBP05166 539 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 PRF1P14222 555 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 XRCC1P18887 633 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 NR1D1P20393 614 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 VIPR1P32241 457 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 HADHAP40939 763 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 PTPN9P43378 593 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 NOP2P46087 812 aaKnown RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 ZNF135P52742 658 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 AP1S1P61966 158 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 ZNF630Q2M218 657 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 LINGO4Q6UY18 593 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 WASH2PQ6VEQ5 465 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 Q6ZS92 163 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 STRADAQ7RTN6 431 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 LZTR1Q8N653 840 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 ZNF606Q8WXB4 792 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 TM9SF4Q92544 642 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 UBXN4Q92575 508 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 TBC1D31Q96DN5 1066 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 NUS1Q96E22 293 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 SLC41A2Q96JW4 573 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 KREMEN1Q96MU8 473 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 ZNF599Q96NL3 588 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 MCCC1Q96RQ3 725 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 SPOCK3Q9BQ16 436 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 DHRS4Q9BTZ2 278 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 LGR4Q9BXB1 951 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 UNKQ9C0B0 810 aaKnown RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 XPO4Q9C0E2 1151 aaKnown RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 WASH6PQ9NQA3 447 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 OGFRQ9NZT2 677 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 RCOR3Q9P2K3 495 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 ARMCX3Q9UH62 379 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 SERTAD1Q9UHV2 236 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 CPAMD8Q8IZJ3 1885 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 USP9YO00507 2555 aaPredicted RBP4.55□□□□□ -1.68
SNCA-213ENST00000618500 KRIT1O00522 736 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 TRAFD1O14545 582 aaPredicted RBP4.55□□□□□ -1.68
SNCA-213ENST00000618500 HTRA2O43464 458 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms