RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 AGFG2O95081 481 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 RASGRP1O95267 797 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 GLB1P16278 677 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 COMTP21964 271 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 SSR1P43307 286 aaKnown RBP17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 SULT1E1P49888 294 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 HADHQ16836 314 aaKnown RBP17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 CERCAMQ5T4B2 595 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 ZNF572Q7Z3I7 529 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 TFAP2DQ7Z6R9 452 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 SETD3Q86TU7 594 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 SFTPA2Q8IWL1 248 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 RHOT1Q8IXI2 618 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 EMC1Q8N766 993 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 TP53I13Q8NBR0 393 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 OR6K2Q8NGY2 324 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 SPON2Q9BUD6 331 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 METTL5Q9NRN9 209 aaKnown RBP17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 AKAP7Q9P0M2 348 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 SRPK3Q9UPE1 567 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 FCF1Q9Y324 198 aaKnown RBP17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 SNX10Q9Y5X0 201 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 ITPR2Q14571 2701 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 SPTBN1Q01082 2364 aaKnown RBP17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 SIGLEC16A6NMB1 481 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 ZNF891A8MT65 544 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 TOR1BO14657 336 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 NKX2-8O15522 239 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 PSTPIP1O43586 416 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 MMP20O60882 483 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 ZMPSTE24O75844 475 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 RNF8O76064 485 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 CXCR5P32302 372 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 UGT1A3P35503 534 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 UQCRFS1P47985 274 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 MTA1Q13330 715 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 MAP9Q49MG5 647 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 GLE1Q53GS7 698 aaKnown RBP17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 RAB6CQ53S08 254 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 SDK2Q58EX2 2172 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 ZNF805Q5CZA5 627 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 EFHC2Q5JST6 749 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 LRRC73Q5JTD7 316 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 RETSATQ6NUM9 610 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 CREG2Q8IUH2 290 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 ZNF683Q8IZ20 524 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 GPBAR1Q8TDU6 330 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 FNIP1Q8TF40 1166 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 TBCBQ99426 244 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 NPY6RQ99463 290 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 C1QTNF7Q9BXJ2 289 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 TM6SF2Q9BZW4 377 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 RAB6CQ9H0N0 254 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 CDH19Q9H159 772 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 RDH14Q9HBH5 336 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 ANLNQ9NQW6 1124 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 PIGVQ9NUD9 493 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.67■□□□□ 0.421e-21■■□□□ 14.2
TRAPPC3-209ENST00000616395 MPP6Q9NZW5 540 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 LRIT1Q9P2V4 623 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 PCDHA3Q9Y5H8 950 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 ACTL7AQ9Y615 435 aa17.67■□□□□ 0.42
TRAPPC3-209ENST00000616395 SPENQ96T58 3664 aaKnown RBP17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 TMEM191CA6NGB0 347 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 PRR19A6NJB7 356 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 AREL1O15033 823 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 ERLIN1O75477 346 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 TM7SF2O76062 418 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 KRT7P08729 469 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 PNLIPP16233 465 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 CTNNA1P35221 906 aaKnown RBP17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 SCNN1AP37088 669 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 MLLT10P55197 1068 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 PTP4A2Q12974 167 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 ARHGEF7Q14155 803 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 IRF4Q15306 451 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 LACTB2Q53H82 288 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 ZFYVE27Q5T4F4 411 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 ENPP7Q6UWV6 458 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 CACNA2D3Q8IZS8 1091 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 RYBPQ8N488 228 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 RCBTB1Q8NDN9 531 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 JOSD2Q8TAC2 188 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 RUNDC3BQ96NL0 473 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 MCEEQ96PE7 176 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 TAAR9Q96RI9 348 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 DDX56Q9NY93 547 aaKnown RBP17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 TTC7AQ9ULT0 858 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 PACSIN2Q9UNF0 486 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 PCDHGA3Q9Y5H0 932 aa17.66■□□□□ 0.42
TRAPPC3-209ENST00000616395 I6L893 689 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 PRKAR1AP10644 381 aa17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 FGF3P11487 239 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 OR1E1P30953 314 aa17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 PEX5P50542 639 aa17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 SRP54P61011 504 aaKnown RBP17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 ARF5P84085 180 aa17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 SLC20A2Q08357 652 aa17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 KLRB1Q12918 225 aa17.65■□□□□ 0.42
TRAPPC3-209ENST00000616395 LONRF2Q1L5Z9 754 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms