RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 KCNE2Q9Y6J6 123 aa18.7■□□□□ 0.58
GABPB1-212ENST00000615671 SLC20A2Q08357 652 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 GALNT13Q8IUC8 556 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 KCT2Q8NC54 265 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 RECQL5O94762 991 aaPredicted RBP18.69■□□□□ 0.58
GABPB1-212ENST00000615671 ALADP13716 330 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 PGDP52209 483 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 DLG2Q15700 870 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 RBFAQ8N0V3 343 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 XPR1Q9UBH6 696 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 SLC6A2P23975 617 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 PDHA2P29803 388 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 NR1D2Q14995 579 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 CHST15Q7LFX5 561 aaPredicted RBP18.69■□□□□ 0.58
GABPB1-212ENST00000615671 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.69■□□□□ 0.581e-6■■■□□ 14.7
GABPB1-212ENST00000615671 ZNF510Q9Y2H8 683 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 SAMHD1Q9Y3Z3 626 aaKnown RBP18.69■□□□□ 0.58
GABPB1-212ENST00000615671 MAP4K5Q9Y4K4 846 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 A0A075B6Q4 140 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 HOXC12P31275 282 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 PCDH1Q08174 1060 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 TTC23Q5W5X9 447 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 CDH24Q86UP0 819 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 HID1Q8IV36 788 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 RPL10LQ96L21 214 aaKnown RBP18.69■□□□□ 0.58
GABPB1-212ENST00000615671 PHPT1Q9NRX4 125 aaPredicted RBP18.69■□□□□ 0.58
GABPB1-212ENST00000615671 SPATA31C2B4DYI2 1134 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 MAGEB3O15480 346 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 ATP5F1P24539 256 aaPredicted RBP18.69■□□□□ 0.58
GABPB1-212ENST00000615671 KLHL35Q6PF15 583 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 PRSS55Q6UWB4 352 aaPredicted RBP18.69■□□□□ 0.58
GABPB1-212ENST00000615671 ALYREFQ86V81 257 aaKnown RBP18.69■□□□□ 0.58
GABPB1-212ENST00000615671 GPR180Q86V85 440 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 PPTC7Q8NI37 304 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 UBIAD1Q9Y5Z9 338 aa18.69■□□□□ 0.58
GABPB1-212ENST00000615671 NWD1Q149M9 1564 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 CCL22O00626 93 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 DBIP07108 87 aaKnown RBP18.68■□□□□ 0.58
GABPB1-212ENST00000615671 NELFEP18615 380 aaKnown RBP18.68■□□□□ 0.58
GABPB1-212ENST00000615671 RNF19BQ6ZMZ0 732 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 COMMD9Q9P000 198 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 IKZF2Q9UKS7 526 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 MYL9P24844 172 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 CYP2C18P33260 490 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 DCBLD1Q8N8Z6 715 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 CD101Q93033 1021 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 ITCHQ96J02 903 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 LEF1Q9UJU2 399 aaPredicted RBP18.68■□□□□ 0.58
GABPB1-212ENST00000615671 PADI3Q9ULW8 664 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 TPST2O60704 377 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 COX4I1P13073 169 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 TAS2R40P59535 323 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 TSHZ1Q6ZSZ6 1077 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 LNX2Q8N448 690 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 HSFY1Q96LI6 401 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 ZMYM2Q9UBW7 1377 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 A0A1W2PQ67 120 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 EPHB6O15197 1021 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 CYP1A2P05177 515 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 MSX2P35548 267 aaPredicted RBP18.68■□□□□ 0.58
GABPB1-212ENST00000615671 MED22Q15528 200 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 PTCHD4Q6ZW05 846 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 ARMCX6Q7L4S7 300 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 UBR7Q8N806 425 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 OR4K2Q8NGD2 314 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 OSBPL2Q9H1P3 480 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 MARCH7Q9H992 704 aa18.68■□□□□ 0.58
GABPB1-212ENST00000615671 AP5Z1O43299 807 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 TPD52L2O43399 206 aaKnown RBP18.67■□□□□ 0.58
GABPB1-212ENST00000615671 SAGP10523 405 aaPredicted RBP18.67■□□□□ 0.58
GABPB1-212ENST00000615671 ITGADQ13349 1161 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 CMC1Q7Z7K0 106 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 ARL14EPQ8N8R7 260 aaPredicted RBP18.67■□□□□ 0.58
GABPB1-212ENST00000615671 HERVK_113Q902F9 699 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 HAS1Q92839 578 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 H3BM21 787 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 LSM12Q3MHD2 195 aaKnown RBP18.67■□□□□ 0.58
GABPB1-212ENST00000615671 ZNF607Q96SK3 696 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 NPAS2Q99743 824 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 SNX15Q9NRS6 342 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 PER2O15055 1255 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 ATG13O75143 517 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 SCGNO76038 276 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 PDE9AO76083 593 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 UGT1A5P35504 534 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 WNT3AP56704 352 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 GTF2BQ00403 316 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 AMIGO2Q86SJ2 522 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 JOSD2Q8TAC2 188 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 ZNF398Q8TD17 642 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 AP2M1Q96CW1 435 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 CAPNS2Q96L46 248 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 TSSK3Q96PN8 268 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 SLC38A3Q99624 504 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 TLR10Q9BXR5 811 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 TRMT13Q9NUP7 481 aaKnown RBP18.67■□□□□ 0.58
GABPB1-212ENST00000615671 TNFAIP8O95379 198 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 KELP23276 732 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 MATKP42679 507 aa18.67■□□□□ 0.58
GABPB1-212ENST00000615671 SLC5A3P53794 718 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms