RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 MAPRE2Q15555 327 aa14.72□□□□□ -0.05
CDH1-213ENST00000612417 TRIP4Q15650 581 aaPredicted RBP14.72□□□□□ -0.05
CDH1-213ENST00000612417 PCSK7Q16549 785 aa14.72□□□□□ -0.05
CDH1-213ENST00000612417 ZNF789Q5FWF6 425 aa14.72□□□□□ -0.05
CDH1-213ENST00000612417 TEX26Q8N6G2 289 aa14.72□□□□□ -0.05
CDH1-213ENST00000612417 ATP6V0D2Q8N8Y2 350 aa14.72□□□□□ -0.05
CDH1-213ENST00000612417 BHLHE22Q8NFJ8 381 aaPredicted RBP14.72□□□□□ -0.05
CDH1-213ENST00000612417 NCSTNQ92542 709 aa14.72□□□□□ -0.05
CDH1-213ENST00000612417 TADA1Q96BN2 335 aa14.72□□□□□ -0.05
CDH1-213ENST00000612417 SGF29Q96ES7 293 aa14.72□□□□□ -0.05
CDH1-213ENST00000612417 NDNQ99608 321 aa14.72□□□□□ -0.05
CDH1-213ENST00000612417 TRMOQ9BU70 441 aa14.72□□□□□ -0.05
CDH1-213ENST00000612417 TTLL2Q9BWV7 592 aa14.72□□□□□ -0.05
CDH1-213ENST00000612417 UNKQ9C0B0 810 aaKnown RBP14.72□□□□□ -0.05
CDH1-213ENST00000612417 SUDS3Q9H7L9 328 aaPredicted RBP14.72□□□□□ -0.05
CDH1-213ENST00000612417 MRPL40Q9NQ50 206 aaKnown RBP14.72□□□□□ -0.05
CDH1-213ENST00000612417 TMEM248Q9NWD8 314 aa14.72□□□□□ -0.05
CDH1-213ENST00000612417 SUCOQ9UBS9 1254 aaKnown RBP14.72□□□□□ -0.05
CDH1-213ENST00000612417 TRIM38O00635 465 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 FGF18O76093 207 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 MMP2P08253 660 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 PABPC4LP0CB38 370 aaKnown RBP14.71□□□□□ -0.05
CDH1-213ENST00000612417 HNRNPLP14866 589 aaKnown RBP eCLIP14.71□□□□□ -0.05
CDH1-213ENST00000612417 STX5Q13190 355 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 PTK2BQ14289 1009 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 HECTD2Q5U5R9 776 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 CWF19L1Q69YN2 538 aaKnown RBP14.71□□□□□ -0.05
CDH1-213ENST00000612417 KDELC2Q7Z4H8 507 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 KLHL23Q8NBE8 558 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 ASB9Q96DX5 294 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 LRGUKQ96M69 825 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 CEP295NLQ96MC4 621 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 SPATA16Q9BXB7 569 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 MRPL1Q9BYD6 325 aaKnown RBP14.71□□□□□ -0.05
CDH1-213ENST00000612417 MCOLN1Q9GZU1 580 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 MFSD1Q9H3U5 465 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 Q9H521 79 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 HACD3Q9P035 362 aa14.71□□□□□ -0.05
CDH1-213ENST00000612417 IGLV3-10A0A075B6K4 115 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 CFLARO15519 480 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 ZDHHC11BP0C7U3 371 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 CCDC166P0CW27 439 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 RAB33AQ14088 237 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 VEPH1Q14D04 833 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 MARC1Q5VT66 337 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 CUZD1Q86UP6 607 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 C7orf61Q8IZ16 206 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 HMGCLL1Q8TB92 370 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 USP13Q92995 863 aaPredicted RBP14.7□□□□□ -0.06
CDH1-213ENST00000612417 HMCESQ96FZ2 354 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 GCNAQ96QF7 691 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 NPAS2Q99743 824 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 ZYG11BQ9C0D3 744 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 EPB41L1Q9H4G0 881 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 NT5MQ9NPB1 228 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 CXXC1Q9P0U4 656 aaPredicted RBP14.7□□□□□ -0.06
CDH1-213ENST00000612417 YIPF1Q9Y548 306 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 PCDHGA7Q9Y5G6 932 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 C15orf38-AP3S2A0A0A6YYH1 394 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 DNAJA2O60884 412 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 SPATA31D3P0C874 917 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 CD86P42081 329 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 NFKB2Q00653 900 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 SLC10A7Q0GE19 358 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 TLR1Q15399 786 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 GK5Q6ZS86 529 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 SPATA31D4Q6ZUB0 917 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 ARPINQ7Z6K5 226 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 LILRA2Q8N149 483 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 PDZD8Q8NEN9 1154 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 L3HYPDHQ96EM0 354 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 BTN2A3PQ96KV6 586 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 CDK5RAP1Q96SZ6 601 aaKnown RBP14.7□□□□□ -0.06
CDH1-213ENST00000612417 GSTO2Q9H4Y5 243 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 TNFRSF12AQ9NP84 129 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 HSFX1Q9UBD0 423 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 DNMT3LQ9UJW3 386 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 VWA7Q9Y334 891 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 INSL6Q9Y581 213 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 CHD5Q8TDI0 1954 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 ANKRD36A6QL64 1941 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 ALPK3Q96L96 1907 aa14.7□□□□□ -0.06
CDH1-213ENST00000612417 EME2A4GXA9 379 aaPredicted RBP14.69□□□□□ -0.06
CDH1-213ENST00000612417 STX16-NPEPL1H3BU86 382 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 J3KR12 359 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 TEX28O15482 410 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 CSPG5O95196 566 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 IMPDH1P20839 514 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 ATP5C1P36542 298 aaKnown RBP14.69□□□□□ -0.06
CDH1-213ENST00000612417 HSPA13P48723 471 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 KPNA1P52294 538 aaPredicted RBP14.69□□□□□ -0.06
CDH1-213ENST00000612417 PSME3P61289 254 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 ACVR1Q04771 509 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 TWF1Q12792 350 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 PLD1Q13393 1074 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 LRP8Q14114 963 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 RBBP5Q15291 538 aaKnown RBP14.69□□□□□ -0.06
CDH1-213ENST00000612417 MS4A13Q5J8X5 152 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 ANKRD49Q8WVL7 239 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 PEX13Q92968 403 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms