RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ZNF678Q5SXM1 525 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 ELMSAN1Q6PJG2 1045 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 LARP4Q71RC2 724 aaKnown RBP eCLIP20.39■□□□□ 0.85
SSBP3-216ENST00000610401 ERMP1Q7Z2K6 904 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 NTAN1Q96AB6 310 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 PPM1MQ96MI6 270 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 INTS7Q9NVH2 962 aaKnown RBP20.39■□□□□ 0.85
SSBP3-216ENST00000610401 COMMD10Q9Y6G5 202 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 A0A087X1B8 175 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 SOAT2O75908 522 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 RPL34P49207 117 aaKnown RBP20.39■□□□□ 0.85
SSBP3-216ENST00000610401 ARPP19P56211 112 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 IL1RL1Q01638 556 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 PAGE3Q5JUK9 113 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 DCLRE1AQ6PJP8 1040 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 ZC3H7AQ8IWR0 971 aaKnown RBP20.39■□□□□ 0.85
SSBP3-216ENST00000610401 HS3ST5Q8IZT8 346 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 VAT1Q99536 393 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 ZFYVE28Q9HCC9 887 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 SLC8A2Q9UPR5 921 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 TOR1BO14657 336 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 ITGB1P05556 798 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 FMO4P31512 558 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 SCNN1AP37088 669 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 GPR15P49685 360 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 SERPINH1P50454 418 aaKnown RBP20.38■□□□□ 0.85
SSBP3-216ENST00000610401 PFKPQ01813 784 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 CAMK1DQ8IU85 385 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 OR13J1Q8NGT2 312 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 HMCESQ96FZ2 354 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 ABI2Q9NYB9 513 aaPredicted RBP20.38■□□□□ 0.85
SSBP3-216ENST00000610401 PDHXO00330 501 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 GPR39O43194 453 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 HSPA1AP0DMV8 641 aaKnown RBP20.38■□□□□ 0.85
SSBP3-216ENST00000610401 HSPA1BP0DMV9 641 aaKnown RBP20.38■□□□□ 0.85
SSBP3-216ENST00000610401 GPX3P22352 226 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 MAP4P27816 1152 aaKnown RBP20.38■□□□□ 0.85
SSBP3-216ENST00000610401 TPD52P55327 224 aaPredicted RBP20.38■□□□□ 0.85
SSBP3-216ENST00000610401 UFM1P61960 85 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 LSM3P62310 102 aaKnown RBP20.38■□□□□ 0.85
SSBP3-216ENST00000610401 NRG1Q02297 640 aaPredicted RBP20.38■□□□□ 0.85
SSBP3-216ENST00000610401 FOXD4Q12950 439 aaPredicted RBP20.38■□□□□ 0.85
SSBP3-216ENST00000610401 BFSP2Q13515 415 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 MIER2Q8N344 545 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 OSBPL6Q9BZF3 934 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 CCDC90BQ9GZT6 254 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 TUBB1Q9H4B7 451 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 A0A087WXM4 84 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 MATN3O15232 486 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 COL6A2P12110 1019 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 UGT1A1P22309 533 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 UGT1A4P22310 534 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 EEF1DP29692 281 aaKnown RBP20.38■□□□□ 0.85
SSBP3-216ENST00000610401 UGT1A3P35503 534 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 UGT1A5P35504 534 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 PIK3CGP48736 1102 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 RPL26P61254 145 aaKnown RBP20.38■□□□□ 0.85
SSBP3-216ENST00000610401 CD300CQ08708 224 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 INPP5AQ14642 412 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 PATL1Q86TB9 770 aaKnown RBP20.38■□□□□ 0.85
SSBP3-216ENST00000610401 TOP6BLQ8N6T0 577 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 KCTD13Q8WZ19 329 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 FCRL5Q96RD9 977 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 ING2Q9H160 280 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 PCDH12Q9NPG4 1184 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 TBC1D13Q9NVG8 400 aa20.38■□□□□ 0.85
SSBP3-216ENST00000610401 THP07101 528 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 KPNA2P52292 529 aaKnown RBP20.37■□□□□ 0.85
SSBP3-216ENST00000610401 MTPNP58546 118 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 DDR2Q16832 855 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 ZNF792Q3KQV3 632 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 ALFQ53S48 1182 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 NPLOC4Q8TAT6 608 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 FNDC8Q8TC99 324 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 LRRC58Q96CX6 371 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 SMARCD1Q96GM5 515 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 KCTD14Q9BQ13 255 aaPredicted RBP20.37■□□□□ 0.85
SSBP3-216ENST00000610401 ANKRD60Q9BZ19 345 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 SP110Q9HB58 689 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 AASSQ9UDR5 926 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 RAD54BQ9Y620 910 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 PTGES3LE9PB15 166 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 KATNA1O75449 491 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 RBP1P09455 135 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 SLC6A2P23975 617 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 VARSP26640 1264 aaKnown RBP20.37■□□□□ 0.85
SSBP3-216ENST00000610401 POLR2IP36954 125 aaKnown RBP20.37■□□□□ 0.85
SSBP3-216ENST00000610401 ALDH3B2P48448 385 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 RANBP10Q6VN20 620 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 BHLHA9Q7RTU4 235 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 GPR180Q86V85 440 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 CILP2Q8IUL8 1156 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 CLEC4FQ8N1N0 589 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 ITFG2Q969R8 447 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 SLC9A7Q96T83 725 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 NMUR1Q9HB89 426 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 ENTPD7Q9NQZ7 604 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 TREX1Q9NSU2 369 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 SELENONQ9NZV5 590 aa20.37■□□□□ 0.85
SSBP3-216ENST00000610401 U3KQV3 271 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms