RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 INVSQ9Y283 1065 aa8.9□□□□□ -0.98
ITGB5-212ENST00000608657 ITM2BQ9Y287 266 aa8.9□□□□□ -0.98
ITGB5-212ENST00000608657 NUMA1Q14980 2115 aa8.9□□□□□ -0.99
ITGB5-212ENST00000608657 FANCMQ8IYD8 2048 aa8.9□□□□□ -0.99
ITGB5-212ENST00000608657 THADAQ6YHU6 1953 aa8.9□□□□□ -0.99
ITGB5-212ENST00000608657 TRPM6Q9BX84 2022 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 TBC1D3DA0A087WVF3 549 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 TBC1D3IA0A087WXS9 549 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 TBC1D3EA0A087X179 549 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 TBC1D3KA0A087X1G2 549 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 EXOC1LA0A1B0GW35 172 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 TBC1D3FA6NER0 549 aaPredicted RBP8.89□□□□□ -0.99
ITGB5-212ENST00000608657 FAM47DPA6NHR8 397 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 TBC1D3LB9A6J9 549 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 AREL1O15033 823 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 SPINT1O43278 529 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 TSPAN6O43657 245 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 RNGTTO60942 597 aaKnown RBP8.89□□□□□ -0.99
ITGB5-212ENST00000608657 RPP40O75818 363 aaKnown RBP8.89□□□□□ -0.99
ITGB5-212ENST00000608657 ELFN1P0C7U0 828 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 TBC1D3HP0C7X1 549 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 CHN1P15882 459 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 VIPR1P32241 457 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 ACSL1P33121 698 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 HNF1BP35680 557 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 MMP12P39900 470 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 MAGEA4P43358 317 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 CHRNA4P43681 627 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 TAS2R38P59533 333 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 SARNPP82979 210 aaKnown RBP8.89□□□□□ -0.99
ITGB5-212ENST00000608657 SEMG2Q02383 582 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 RPL6Q02878 288 aaKnown RBP8.89□□□□□ -0.99
ITGB5-212ENST00000608657 CDH17Q12864 832 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 KCNJ11Q14654 390 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 SKIDA1Q1XH10 827 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 TNFAIP8L3Q5GJ75 292 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 TBC1D3GQ6DHY5 549 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 TTC19Q6DKK2 380 aaPredicted RBP8.89□□□□□ -0.99
ITGB5-212ENST00000608657 TBC1D3CQ6IPX1 549 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 KIAA1161Q6NSJ0 714 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 RANBP10Q6VN20 620 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 CEP68Q76N32 757 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 TBC1D3Q8IZP1 549 aaPredicted RBP8.89□□□□□ -0.99
ITGB5-212ENST00000608657 FRMD1Q8N878 549 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 DNAAF3Q8N9W5 541 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 OR52K1Q8NGK4 314 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 OR2T34Q8NGX1 318 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 GAB3Q8WWW8 586 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 CPT1BQ92523 772 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 ALKBH8Q96BT7 664 aaKnown RBP8.89□□□□□ -0.99
ITGB5-212ENST00000608657 SCRN2Q96FV2 425 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 SEC16BQ96JE7 1060 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 MCCC1Q96RQ3 725 aaPredicted RBP8.89□□□□□ -0.99
ITGB5-212ENST00000608657 SRPK1Q96SB4 655 aaKnown RBP8.89□□□□□ -0.99
ITGB5-212ENST00000608657 GPR174Q9BXC1 333 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 PREBQ9HCU5 417 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 SSU72Q9NP77 194 aaKnown RBP8.89□□□□□ -0.99
ITGB5-212ENST00000608657 HACD3Q9P035 362 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 GGT7Q9UJ14 662 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 PPIL1Q9Y3C6 166 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 PCDHGA2Q9Y5H1 932 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 FADS3Q9Y5Q0 445 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 SCN8AQ9UQD0 1980 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 PLXNA2O75051 1894 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 CUL9Q8IWT3 2517 aa8.89□□□□□ -0.99
ITGB5-212ENST00000608657 MUC3AQ02505 3323 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 SPAG17Q6Q759 2223 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 C1orf232A0A0U1RR37 186 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 A0A1W2PQU0 124 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 TCRBV7S3A2A0A539 114 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 CFAP73A6NFT4 308 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 NPIPB15A6NHN6 443 aaPredicted RBP8.88□□□□□ -0.99
ITGB5-212ENST00000608657 SMIM23A6NLE4 172 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 MEI4A8MW99 385 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 A8MX80 341 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 AP3B1O00203 1094 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 TMEM63AO94886 807 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 ACSL3O95573 720 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 SLC4A1P02730 911 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 VIMP08670 466 aaKnown RBP8.88□□□□□ -0.99
ITGB5-212ENST00000608657 GSTA2P09210 222 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 PIRTP0C851 137 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 ZNF30P17039 623 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 BCKDHBP21953 392 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 STX2P32856 288 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 CNR2P34972 360 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 MAGEA6P43360 314 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 PPP2CBP62714 309 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 PPP2CAP67775 309 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 CDK16Q00536 496 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 RALGDSQ12967 914 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 SEPT7Q16181 437 aaKnown RBP8.88□□□□□ -0.99
ITGB5-212ENST00000608657 CNGA3Q16281 694 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 HIF1AQ16665 826 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 TMEM52BQ4KMG9 183 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 LACTB2Q53H82 288 aaPredicted RBP8.88□□□□□ -0.99
ITGB5-212ENST00000608657 RNASEH2BQ5TBB1 312 aaKnown RBP8.88□□□□□ -0.99
ITGB5-212ENST00000608657 ANKRD22Q5VYY1 191 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 LRRC66Q68CR7 880 aa8.88□□□□□ -0.99
ITGB5-212ENST00000608657 NEK5Q6P3R8 708 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms