RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 NDNQ99608 321 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 PITPNM3Q9BZ71 974 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 GTSE1Q9NYZ3 720 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 CRYL1Q9Y2S2 319 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 VWA7Q9Y334 891 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 WASF2Q9Y6W5 498 aa21.56■■□□□ 1.04
USP6NL-204ENST00000606752 ECI2O75521 394 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 CLDN7O95471 211 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 PROCP04070 461 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 GJA4P35212 333 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 IRF9Q00978 393 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 KDSRQ06136 332 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 GRIN2CQ14957 1233 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 COL19A1Q14993 1142 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 HECTD2Q5U5R9 776 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 BRAT1Q6PJG6 821 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 PIGWQ7Z7B1 504 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 TRIM42Q8IWZ5 723 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 PHTF2Q8N3S3 785 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 CCDC63Q8NA47 563 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 TSPAN17Q96FV3 270 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 LRIG1Q96JA1 1093 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 MCCC1Q96RQ3 725 aaPredicted RBP21.55■■□□□ 1.04
USP6NL-204ENST00000606752 ZNF358Q9NW07 568 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.55■■□□□ 1.04
USP6NL-204ENST00000606752 BPGMP07738 259 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 POU3F3P20264 500 aaPredicted RBP21.55■■□□□ 1.04
USP6NL-204ENST00000606752 GDI1P31150 447 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 OPRD1P41143 372 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 XIAPP98170 497 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 DBN1Q16643 649 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 CRTC1Q6UUV9 634 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 NUDCD3Q8IVD9 361 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 TERB1Q8NA31 727 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 TTC8Q8TAM2 541 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 GRIN3AQ8TCU5 1115 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 TSNARE1Q96NA8 513 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 TRMT61BQ9BVS5 477 aaKnown RBP21.55■■□□□ 1.04
USP6NL-204ENST00000606752 C1QTNF1Q9BXJ1 281 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 OSBPL1AQ9BXW6 950 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 TTYH1Q9H313 450 aaPredicted RBP21.55■■□□□ 1.04
USP6NL-204ENST00000606752 BRD9Q9H8M2 597 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 IL36AQ9UHA7 158 aa21.55■■□□□ 1.04
USP6NL-204ENST00000606752 REV3LO60673 3130 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 A0A087X1B8 175 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 NPIPB15A6NHN6 443 aaPredicted RBP21.54■■□□□ 1.04
USP6NL-204ENST00000606752 PFDN6O15212 129 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 LEFTY1O75610 366 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 PRSS56P0CW18 603 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 PGGT1BP53609 377 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 IRX4P78413 519 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 ZRANB3Q5FWF4 1079 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 ARSIQ5FYB1 569 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 FAM45BPQ6NSW5 357 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 FAM45AQ8TCE6 357 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 NECTIN4Q96NY8 510 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 OLFM1Q99784 485 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 ELAC2Q9BQ52 826 aaKnown RBP21.54■■□□□ 1.04
USP6NL-204ENST00000606752 RPP25Q9BUL9 199 aaKnown RBP21.54■■□□□ 1.04
USP6NL-204ENST00000606752 MECRQ9BV79 373 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 MTG2Q9H4K7 406 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 SIRPGQ9P1W8 387 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 VPS9D1Q9Y2B5 631 aa21.54■■□□□ 1.04
USP6NL-204ENST00000606752 TMEM265A0A087WTH1 108 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 TBC1D3BA6NDS4 549 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 KLF11O14901 512 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 NDUFS3O75489 264 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 EIF2DP41214 584 aaKnown RBP21.53■■□□□ 1.04
USP6NL-204ENST00000606752 TTPAP49638 278 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 ADGRE1Q14246 886 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 ZNF460Q14592 562 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 AARS2Q5JTZ9 985 aaKnown RBP21.53■■□□□ 1.04
USP6NL-204ENST00000606752 FAM47EQ6ZV65 393 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 PIANPQ8IYJ0 282 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 CBARPQ8N350 705 aaPredicted RBP21.53■■□□□ 1.04
USP6NL-204ENST00000606752 SMRP1Q8NCR6 262 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 GRAMD1AQ96CP6 724 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 SEC16BQ96JE7 1060 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 NMRAL1Q9HBL8 299 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 SLCO1B3Q9NPD5 702 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 FNDC3AQ9Y2H6 1198 aaKnown RBP21.53■■□□□ 1.04
USP6NL-204ENST00000606752 SLC30A1Q9Y6M5 507 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 BPTFQ12830 3046 aa21.53■■□□□ 1.04
USP6NL-204ENST00000606752 KIF26AQ9ULI4 1882 aaPredicted RBP21.53■■□□□ 1.04
USP6NL-204ENST00000606752 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.52■■□□□ 1.04
USP6NL-204ENST00000606752 EDF1O60869 148 aaKnown RBP21.52■■□□□ 1.04
USP6NL-204ENST00000606752 BGNP21810 368 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 CDKN1CP49918 316 aaPredicted RBP21.52■■□□□ 1.04
USP6NL-204ENST00000606752 CACNG1Q06432 222 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 PREPLQ4J6C6 727 aaPredicted RBP21.52■■□□□ 1.04
USP6NL-204ENST00000606752 FNDC3BQ53EP0 1204 aaKnown RBP21.52■■□□□ 1.04
USP6NL-204ENST00000606752 RNF187Q5TA31 235 aaPredicted RBP21.52■■□□□ 1.04
USP6NL-204ENST00000606752 PSAPL1Q6NUJ1 521 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 ZNF549Q6P9A3 640 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 MTSS1LQ765P7 747 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 CCDC91Q7Z6B0 441 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 TSPAN33Q86UF1 283 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 HCAR2Q8TDS4 363 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 LPGAT1Q92604 370 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 APPL1Q9UKG1 709 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms