RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 FEM1CQ96JP0 617 aa11.79□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.79□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 BPIFA1Q9NP55 256 aa11.79□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 MID1IP1Q9NPA3 183 aa11.79□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 CACNA2D2Q9NY47 1150 aa11.79□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 DTNAQ9Y4J8 743 aa11.79□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 NCF1BA6NI72 391 aaPredicted RBP11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 NCF1CA8MVU1 366 aaPredicted RBP11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 ACSL4O60488 711 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 CDK14O94921 469 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 ALDOCP09972 364 aaKnown RBP11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 ZDHHC11BP0C7U3 371 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 NCF1P14598 390 aaPredicted RBP11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 MAPKAPK2P49137 400 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 HERVK_113P63132 956 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 FOLH1Q04609 750 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 RING1Q06587 406 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 UGT3A2Q3SY77 523 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 GALNT4Q8N4A0 578 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 TRPC4APQ8TEL6 797 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 ESAMQ96AP7 390 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 LRCH3Q96II8 777 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 TRIB3Q96RU7 358 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 PKP2Q99959 881 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 ERVK-6Q9BXR3 956 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 IL1RL2Q9HB29 575 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 ZDHHC7Q9NXF8 308 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 MED16Q9Y2X0 877 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 PRORSD1PA6NEY8 169 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 TBKBP1A7MCY6 615 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 CASQ2O14958 399 aaPredicted RBP11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 TBC1D4O60343 1298 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 HSPA1AP0DMV8 641 aaKnown RBP11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 HSPA1BP0DMV9 641 aaKnown RBP11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 GFAPP14136 432 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 OR1D2P34982 312 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 ATP5C1P36542 298 aaKnown RBP11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 STC1P52823 247 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 ACVR1Q04771 509 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 LRP8Q14114 963 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 TLR1Q15399 786 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 SETMARQ53H47 684 aaPredicted RBP11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 OGFRL1Q5TC84 451 aaPredicted RBP11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 LHX8Q68G74 356 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 REP15Q6BDI9 236 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 CYP2R1Q6VVX0 501 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 LARP4Q71RC2 724 aaKnown RBP eCLIP11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 ICA1LQ8NDH6 482 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 BHMTQ93088 406 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 ATP6V1E2Q96A05 226 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 C19orf60Q96EN9 201 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 DCUN1D1Q96GG9 259 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 LRGUKQ96M69 825 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 PRICKLE1Q96MT3 831 aaPredicted RBP11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 AKTIPQ9H8T0 292 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 SRRDQ9UH36 339 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 LRFN2Q9ULH4 789 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 BTRCQ9Y297 605 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 ASB3Q9Y575 518 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 THSD7BQ9C0I4 1608 aa11.78□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 H3BNC9 293 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 OR1I1O60431 355 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 BCAS2O75934 225 aaPredicted RBP11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 NDST3O95803 873 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 PRLP01236 227 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 BMP1P13497 986 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 SELPP16109 830 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 YBX1P67809 324 aaKnown RBP11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 SATB1Q01826 763 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 TNK2Q07912 1038 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 GK3PQ14409 553 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 GRB7Q14451 532 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 IL23RQ5VWK5 629 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 GALNT7Q86SF2 657 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 FUNDC1Q8IVP5 155 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 PIANPQ8IYJ0 282 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 FBXO22Q8NEZ5 403 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 RAET1EQ8TD07 263 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 SCLYQ96I15 445 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 SPATA17Q96L03 361 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 SLC30A3Q99726 388 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 TTPALQ9BTX7 342 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 CINPQ9BW66 212 aaPredicted RBP11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 SEMA6AQ9H2E6 1030 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 VCX3BQ9H321 246 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 DNMT3LQ9UJW3 386 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 VPS28Q9UK41 221 aa11.77□□□□□ -0.52
HMGN3-AS1-201ENST00000604516 COCHO43405 550 aa11.77□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 RNASEH2AO75792 299 aaKnown RBP11.77□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 RHOBTB1O94844 696 aa11.77□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 CSPG5O95196 566 aa11.77□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 SQLEQ14534 574 aa11.77□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 THEMIS2Q5TEJ8 643 aa11.77□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 GLT6D1Q7Z4J2 308 aa11.77□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 DDIASQ8IXT1 998 aa11.77□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 AFAP1L2Q8N4X5 818 aa11.77□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 EFHBQ8N7U6 833 aa11.77□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 DCBLD1Q8N8Z6 715 aa11.77□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 LPCAT1Q8NF37 534 aa11.77□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 L3HYPDHQ96EM0 354 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms