RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 PBX1P40424 430 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 B4GALNT1Q00973 533 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 DPTQ07507 201 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 ILF3Q12906 894 aaKnown RBP eCLIP16.97■□□□□ 0.31
SCAF1-204ENST00000601038 KRT81Q14533 505 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 ZSCAN23Q3MJ62 389 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 Q6ZVL8 140 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 USP45Q70EL2 814 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 ZNF605Q86T29 641 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 NRROSQ86YC3 692 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 JAMLQ86YT9 394 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 FAM71BQ8TC56 605 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 PIH1D2Q8WWB5 315 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 LOXL2Q9Y4K0 774 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 MGAQ8IWI9 3026 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 A0A087X0T9 212 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 B4GAT1O43505 415 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 FGF1P05230 155 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 FAM228BP0C875 321 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 KRT10P13645 584 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 ZBED6P86452 979 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 FANCCQ00597 558 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 MMRN1Q13201 1228 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 HADHQ16836 314 aaKnown RBP16.96■□□□□ 0.31
SCAF1-204ENST00000601038 RAET1GQ6H3X3 334 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 ZNF438Q7Z4V0 828 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 TECPR1Q7Z6L1 1165 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 TSPAN33Q86UF1 283 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 SLITRK4Q8IW52 837 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 NDUFAF2Q8N183 169 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 ZDHHC1Q8WTX9 485 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 IQCDQ96DY2 449 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 CMKLR1Q99788 373 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 SEMA3CQ99985 751 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 NT5MQ9NPB1 228 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 TAAR2Q9P1P5 351 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 PISDQ9UG56 409 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 CAPN11Q9UMQ6 739 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 SUFUQ9UMX1 484 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 SLC17A4Q9Y2C5 497 aa16.96■□□□□ 0.31
SCAF1-204ENST00000601038 GOLGA6CA6NDK9 693 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 GOLGA6BA6NDN3 693 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 ZW10O43264 779 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 EFSO43281 561 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 FZD6O60353 706 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 IVLP07476 585 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 PDHA1P08559 390 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 GOLGA6DP0CG33 693 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 PLA2G2AP14555 144 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 CTPS1P17812 591 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 CES1P23141 567 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 GARSP41250 739 aaKnown RBP16.95■□□□□ 0.3
SCAF1-204ENST00000601038 GNPDA1P46926 289 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 ARSEP51690 589 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 MAZP56270 477 aaKnown RBP16.95■□□□□ 0.3
SCAF1-204ENST00000601038 UBASH3AP57075 661 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 TPM4P67936 248 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 PEX6Q13608 980 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 PTPRRQ15256 657 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 NFKBIBQ15653 356 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 CLPPQ16740 277 aaPredicted RBP16.95■□□□□ 0.3
SCAF1-204ENST00000601038 CCDC122Q5T0U0 273 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 ALKBH5Q6P6C2 394 aaKnown RBP16.95■□□□□ 0.3
SCAF1-204ENST00000601038 TMPRSS9Q7Z410 1059 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 PIM3Q86V86 326 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 CPLX3Q8WVH0 158 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 POLR1EQ9GZS1 481 aaKnown RBP16.95■□□□□ 0.3
SCAF1-204ENST00000601038 SUDS3Q9H7L9 328 aaPredicted RBP16.95■□□□□ 0.3
SCAF1-204ENST00000601038 CBX8Q9HC52 389 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 GOLGA6AQ9NYA3 693 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 AHCTF1Q8WYP5 2266 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 SCN8AQ9UQD0 1980 aa16.95■□□□□ 0.3
SCAF1-204ENST00000601038 RHPN2P1A8MT19 583 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 ECEL1O95672 775 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 CPNE6O95741 557 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 CD48P09326 243 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 ZNF30P17039 623 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 ITIH1P19827 911 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 AK4P27144 223 aaPredicted RBP16.94■□□□□ 0.3
SCAF1-204ENST00000601038 ALDH4A1P30038 563 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 ADCY8P40145 1251 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 SSR1P43307 286 aaKnown RBP16.94■□□□□ 0.3
SCAF1-204ENST00000601038 GPR1P46091 355 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 POLD2P49005 469 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 CTBSQ01459 385 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 ITKQ08881 620 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 GALNT2Q10471 571 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 LY6DQ14210 128 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 NR1D2Q14995 579 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 PAFAH1B3Q15102 231 aaKnown RBP16.94■□□□□ 0.3
SCAF1-204ENST00000601038 KIAA1614Q5VZ46 1190 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 LRRC66Q68CR7 880 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 ALG1LQ6GMV1 187 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 TIGD7Q6NT04 549 aaPredicted RBP16.94■□□□□ 0.3
SCAF1-204ENST00000601038 LUZP1Q86V48 1076 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 NLRP8Q86W28 1048 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 PTCD2Q8WV60 388 aaKnown RBP16.94■□□□□ 0.3
SCAF1-204ENST00000601038 MAML1Q92585 1016 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 AP2M1Q96CW1 435 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 SCARF2Q96GP6 870 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms