RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 GRSF1Q12849 480 aaKnown RBP eCLIP12.76□□□□□ -0.37
ZNF548-210ENST00000600442 SFSWAPQ12872 951 aaKnown RBP12.76□□□□□ -0.37
ZNF548-210ENST00000600442 HHATQ5VTY9 493 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 TMEM215Q68D42 235 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 CERS6Q6ZMG9 384 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 TPRG1Q6ZUI0 275 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 C12orf40Q86WS4 652 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 CYP4X1Q8N118 509 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 STK40Q8N2I9 435 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 C2CD4AQ8NCU7 369 aaPredicted RBP12.76□□□□□ -0.37
ZNF548-210ENST00000600442 OR4K2Q8NGD2 314 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 FRS2Q8WU20 508 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 SORCS1Q8WY21 1168 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 ECHDC3Q96DC8 303 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 CDKN2AIPNLQ96HQ2 116 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 KLHL32Q96NJ5 620 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 LYSMD1Q96S90 227 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 TRIM56Q9BRZ2 755 aaKnown RBP12.76□□□□□ -0.37
ZNF548-210ENST00000600442 PLA2G2FQ9BZM2 168 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 FBRSQ9HAH7 460 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 KCNK12Q9HB15 430 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 INTS10Q9NVR2 710 aaKnown RBP12.76□□□□□ -0.37
ZNF548-210ENST00000600442 ANKRD6Q9Y2G4 727 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 PPIL1Q9Y3C6 166 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 STARD13Q9Y3M8 1113 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 FRYLO94915 3013 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 FANCMQ8IYD8 2048 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 DOCK6Q96HP0 2047 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 NOTCH4Q99466 2003 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 OTOGLQ3ZCN5 2332 aa12.76□□□□□ -0.37
ZNF548-210ENST00000600442 RGSL1A5PLK6 1076 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 PRRT4C9JH25 899 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 LEFTY1O75610 366 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 C1QAP02745 245 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 GSTA1P08263 222 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 PIRTP0C851 137 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 PYGBP11216 843 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 HNRNPLP14866 589 aaKnown RBP eCLIP12.75□□□□□ -0.37
ZNF548-210ENST00000600442 CTPS1P17812 591 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 ITGALP20701 1170 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 DRD1P21728 446 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 PSMA3P25788 255 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 SLC8A1P32418 973 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 HNF1BP35680 557 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 OPRD1P41143 372 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 ZNF140P52738 457 aaPredicted RBP12.75□□□□□ -0.37
ZNF548-210ENST00000600442 TMPRSS15P98073 1019 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 POU4F1Q01851 419 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 CACNG1Q06432 222 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 ELP6Q0PNE2 266 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 MSLNQ13421 630 aaPredicted RBP12.75□□□□□ -0.37
ZNF548-210ENST00000600442 ZNF234Q14588 700 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 IHHQ14623 411 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 USP10Q14694 798 aaKnown RBP12.75□□□□□ -0.37
ZNF548-210ENST00000600442 STARD3Q14849 445 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 ANGPT1Q15389 498 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 PTPRNQ16849 979 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 ARSIQ5FYB1 569 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 RAPH1Q70E73 1250 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 PTAR1Q7Z6K3 402 aaPredicted RBP12.75□□□□□ -0.37
ZNF548-210ENST00000600442 TTC7BQ86TV6 843 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 CILP2Q8IUL8 1156 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 TRIM42Q8IWZ5 723 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 CHPFQ8IZ52 775 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 ANKRD42Q8N9B4 389 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 DTWD2Q8NBA8 298 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 OR13J1Q8NGT2 312 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 TTC8Q8TAM2 541 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 GRIN3AQ8TCU5 1115 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 APOPT1Q96IL0 206 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 DNAJC1Q96KC8 554 aaKnown RBP12.75□□□□□ -0.37
ZNF548-210ENST00000600442 TBATAQ96M53 351 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 ZNF778Q96MU6 729 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 AGAP2Q99490 1192 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 SMYD2Q9NRG4 433 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 PSD3Q9NYI0 1048 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 THAP10Q9P2Z0 257 aaPredicted RBP12.75□□□□□ -0.37
ZNF548-210ENST00000600442 SLC2A6Q9UGQ3 507 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 MID2Q9UJV3 735 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 FBXL21Q9UKT6 434 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 GRID1Q9ULK0 1009 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 COMMD10Q9Y6G5 202 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 DNAH14Q0VDD8 3507 aa12.75□□□□□ -0.37
ZNF548-210ENST00000600442 CCDC162PA2VCL2 907 aa12.74□□□□□ -0.37
ZNF548-210ENST00000600442 OTOL1A6NHN0 477 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-210ENST00000600442 SRRM3A6NNA2 597 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-210ENST00000600442 UPK3BL1B0FP48 263 aa12.74□□□□□ -0.37
ZNF548-210ENST00000600442 UPK3BL2E5RIL1 263 aa12.74□□□□□ -0.37
ZNF548-210ENST00000600442 H7C0S8 307 aa12.74□□□□□ -0.37
ZNF548-210ENST00000600442 KPNA3O00505 521 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-210ENST00000600442 TRIM24O15164 1050 aa12.74□□□□□ -0.37
ZNF548-210ENST00000600442 PIAS1O75925 651 aa12.74□□□□□ -0.37
ZNF548-210ENST00000600442 GOT2P00505 430 aaKnown RBP12.74□□□□□ -0.37
ZNF548-210ENST00000600442 APOA4P06727 396 aa12.74□□□□□ -0.37
ZNF548-210ENST00000600442 NEFHP12036 1026 aa12.74□□□□□ -0.37
ZNF548-210ENST00000600442 STMN1P16949 149 aa12.74□□□□□ -0.37
ZNF548-210ENST00000600442 SLC1A2P43004 574 aa12.74□□□□□ -0.37
ZNF548-210ENST00000600442 LEPRP48357 1165 aaKnown RBP12.74□□□□□ -0.37
ZNF548-210ENST00000600442 GNGT1P63211 74 aa12.74□□□□□ -0.37
ZNF548-210ENST00000600442 SLC18A2Q05940 514 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms