RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 JUNDP17535 347 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 DGKAP23743 735 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 TRIM23P36406 574 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 GRK6P43250 576 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 MPP3Q13368 585 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 OLIG2Q13516 323 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 SNX1Q13596 522 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 NFATC4Q14934 902 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 SIX1Q15475 284 aaPredicted RBP15.19■□□□□ 0.02
LIG1-219ENST00000600055 TRIP6Q15654 476 aaKnown RBP15.19■□□□□ 0.02
LIG1-219ENST00000600055 SIRPB2Q5JXA9 342 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 ITPRIPL1Q6GPH6 555 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 ENPP7Q6UWV6 458 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 ERMP1Q7Z2K6 904 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 RBFAQ8N0V3 343 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 TSACCQ96A04 125 aaPredicted RBP15.19■□□□□ 0.02
LIG1-219ENST00000600055 AGAP2Q99490 1192 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 GOLGA6AQ9NYA3 693 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 SPTBN4Q9H254 2564 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 TMEM202A6NGA9 273 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 AURKAO14965 403 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 SCAMP1O15126 338 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 CEP104O60308 925 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 FGGP02679 453 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 GEMP55040 296 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 SIM1P81133 766 aaPredicted RBP15.18■□□□□ 0.02
LIG1-219ENST00000600055 OASLQ15646 514 aaKnown RBP15.18■□□□□ 0.02
LIG1-219ENST00000600055 SLC1A5Q15758 541 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 FAXCQ5TGI0 409 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 RAET1GQ6H3X3 334 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 CCDC70Q6NSX1 233 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 HEATR4Q86WZ0 1026 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 PHACTR4Q8IZ21 702 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 TAB3Q8N5C8 712 aaPredicted RBP15.18■□□□□ 0.02
LIG1-219ENST00000600055 AP2M1Q96CW1 435 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 WDR24Q96S15 920 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 FICDQ9BVA6 458 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 RIOK2Q9BVS4 552 aaKnown RBP15.18■□□□□ 0.02
LIG1-219ENST00000600055 WDR26Q9H7D7 661 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 ZFYVE1Q9HBF4 777 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 MAGEE1Q9HCI5 957 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 ZNF711Q9Y462 761 aa15.18■□□□□ 0.02
LIG1-219ENST00000600055 CACNB4O00305 520 aaPredicted RBP15.17■□□□□ 0.02
LIG1-219ENST00000600055 TRIM38O00635 465 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 FFAR2O15552 330 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 ANXA9O76027 345 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 METTL18O95568 372 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 SOD1P00441 154 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 EPOP01588 193 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 ATP1A1P05023 1023 aaKnown RBP15.17■□□□□ 0.02
LIG1-219ENST00000600055 GIMD1P0DJR0 217 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 TSHRP16473 764 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 GPR1P46091 355 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 SPINT3P49223 89 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 KIAA1024LP59773 190 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 HNRNPKP61978 463 aaKnown RBP eCLIP15.17■□□□□ 0.02
LIG1-219ENST00000600055 PPARDQ03181 441 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 DPTQ07507 201 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 C1orf61Q13536 156 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 SPARCL1Q14515 664 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 TCEA2Q15560 299 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 ALG11Q2TAA5 492 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 ARHGEF18Q6ZSZ5 1173 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 RD3Q7Z3Z2 195 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 TMC3Q7Z5M5 1100 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 PRUNE1Q86TP1 453 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 HID1Q8IV36 788 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 ZNF548Q8NEK5 533 aaPredicted RBP15.17■□□□□ 0.02
LIG1-219ENST00000600055 CCHCR1Q8TD31 782 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 OR1E3Q8WZA6 343 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 WDR92Q96MX6 357 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 APOL2Q9BQE5 337 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 FSD1LQ9BXM9 530 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 GPR63Q9BZJ6 419 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 MRPL40Q9NQ50 206 aaKnown RBP15.17■□□□□ 0.02
LIG1-219ENST00000600055 KCTD5Q9NXV2 234 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 KLQ9UEF7 1012 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 APOBEC3BQ9UH17 382 aaKnown RBP15.17■□□□□ 0.02
LIG1-219ENST00000600055 JRKLQ9Y4A0 524 aa15.17■□□□□ 0.02
LIG1-219ENST00000600055 H3BM21 787 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 GCATO75600 419 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 CELA2BP08218 269 aaPredicted RBP15.16■□□□□ 0.02
LIG1-219ENST00000600055 HOXC4P09017 264 aaPredicted RBP15.16■□□□□ 0.02
LIG1-219ENST00000600055 ETS1P14921 441 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 HTR1BP28222 390 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 ADRA1AP35348 466 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 SRP54P61011 504 aaKnown RBP15.16■□□□□ 0.02
LIG1-219ENST00000600055 CDK3Q00526 305 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 CCDC173Q0VFZ6 552 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 PRPSAP1Q14558 356 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 LONRF2Q1L5Z9 754 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 INAVAQ3KP66 663 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 PRRT3Q5FWE3 981 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 ZNF765Q7L2R6 523 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 TRIM74Q86UV6 250 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 NRSN1Q8IZ57 195 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 LMX1AQ8TE12 382 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 PTCD2Q8WV60 388 aaKnown RBP15.16■□□□□ 0.02
LIG1-219ENST00000600055 PDXPQ96GD0 296 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 MS4A14Q96JA4 679 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms