RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 TBC1D3CQ6IPX1 549 aa21.85■■□□□ 1.09
LTBP4-224ENST00000599016 KIAA1161Q6NSJ0 714 aa21.85■■□□□ 1.09
LTBP4-224ENST00000599016 TRMT10CQ7L0Y3 403 aaKnown RBP21.85■■□□□ 1.09
LTBP4-224ENST00000599016 C1orf210Q8IVY1 113 aa21.85■■□□□ 1.09
LTBP4-224ENST00000599016 RAVER1Q8IY67 606 aaKnown RBP21.85■■□□□ 1.09
LTBP4-224ENST00000599016 TBC1D3Q8IZP1 549 aaPredicted RBP21.85■■□□□ 1.09
LTBP4-224ENST00000599016 OR4K2Q8NGD2 314 aa21.85■■□□□ 1.09
LTBP4-224ENST00000599016 CDC42EP4Q9H3Q1 356 aaKnown RBP21.85■■□□□ 1.09
LTBP4-224ENST00000599016 PRMT8Q9NR22 394 aaPredicted RBP21.85■■□□□ 1.09
LTBP4-224ENST00000599016 NLE1Q9NVX2 485 aaPredicted RBP21.85■■□□□ 1.09
LTBP4-224ENST00000599016 IL17CQ9P0M4 197 aa21.85■■□□□ 1.09
LTBP4-224ENST00000599016 KCTD3Q9Y597 815 aa21.85■■□□□ 1.09
LTBP4-224ENST00000599016 CACNA1IQ9P0X4 2223 aa21.85■■□□□ 1.09
LTBP4-224ENST00000599016 NUMA1Q14980 2115 aa21.85■■□□□ 1.09
LTBP4-224ENST00000599016 RGSL1A5PLK6 1076 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 PROB1E7EW31 1015 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 LZTS3O60299 673 aaPredicted RBP21.84■■□□□ 1.09
LTBP4-224ENST00000599016 MMP20O60882 483 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 SPAG6O75602 509 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 C1SP09871 688 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 TSHRP16473 764 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 NMBRP28336 390 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 PXNP49023 591 aaPredicted RBP21.84■■□□□ 1.09
LTBP4-224ENST00000599016 TMEM135Q86UB9 458 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 OR13C4Q8NGS5 318 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 OR2T34Q8NGX1 318 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 CAVIN3Q969G5 261 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 DNAJC1Q96KC8 554 aaKnown RBP21.84■■□□□ 1.09
LTBP4-224ENST00000599016 SPACA7Q96KW9 195 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 WDR83Q9BRX9 315 aaKnown RBP21.84■■□□□ 1.09
LTBP4-224ENST00000599016 BPIFA1Q9NP55 256 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 CD93Q9NPY3 652 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 KCTD5Q9NXV2 234 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.84■■□□□ 1.09
LTBP4-224ENST00000599016 PLXND1Q9Y4D7 1925 aa21.84■■□□□ 1.09
LTBP4-224ENST00000599016 CCDC163A0A0D9SF12 145 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 PRR23AA6NEV1 266 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 FAM47DPA6NHR8 397 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 RNGTTO60942 597 aaKnown RBP21.83■■□□□ 1.09
LTBP4-224ENST00000599016 RPP40O75818 363 aaKnown RBP21.83■■□□□ 1.09
LTBP4-224ENST00000599016 SEMA4FO95754 770 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 C6P13671 934 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 CD6P30203 668 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 ACSL1P33121 698 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 PHBP35232 272 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 RPS21P63220 83 aaKnown RBP21.83■■□□□ 1.09
LTBP4-224ENST00000599016 TMPRSS15P98073 1019 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 CRYMQ14894 314 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 KYNUQ16719 465 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 USP39Q53GS9 565 aaKnown RBP21.83■■□□□ 1.09
LTBP4-224ENST00000599016 STEAP4Q687X5 459 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 ESRP1Q6NXG1 681 aaKnown RBP21.83■■□□□ 1.09
LTBP4-224ENST00000599016 CES3Q6UWW8 571 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 UNC5AQ6ZN44 842 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 CBARPQ8N350 705 aaPredicted RBP21.83■■□□□ 1.09
LTBP4-224ENST00000599016 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.83■■□□□ 1.091e-11■■■■■ 30.3
LTBP4-224ENST00000599016 MFSD3Q96ES6 412 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 TOE1Q96GM8 510 aaKnown RBP21.83■■□□□ 1.09
LTBP4-224ENST00000599016 ZNF778Q96MU6 729 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 VPS37BQ9H9H4 285 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 TREX1Q9NSU2 369 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 WSB2Q9NYS7 404 aaPredicted RBP21.83■■□□□ 1.09
LTBP4-224ENST00000599016 NINJ2Q9NZG7 142 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 FAM169AQ9Y6X4 670 aa21.83■■□□□ 1.09
LTBP4-224ENST00000599016 ZNF106Q9H2Y7 1883 aaKnown RBP21.82■■□□□ 1.08
LTBP4-224ENST00000599016 WNT9AO14904 365 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 GALR2O43603 387 aaPredicted RBP21.82■■□□□ 1.08
LTBP4-224ENST00000599016 TM7SF2O76062 418 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 SPINT3P49223 89 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 PRAMEP78395 509 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 ACVR1Q04771 509 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 KIAA0930Q6ICG6 404 aaPredicted RBP21.82■■□□□ 1.08
LTBP4-224ENST00000599016 HSD11B1LQ7Z5J1 315 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 HORMAD1Q86X24 394 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 NRSN1Q8IZ57 195 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 GSDMBQ8TAX9 411 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 EID2BQ96D98 161 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 COQ10AQ96MF6 247 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 TXLNGYQ9BZA5 131 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 CDH19Q9H159 772 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 SEMA4AQ9H3S1 761 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 SLC2A6Q9UGQ3 507 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 APPL1Q9UKG1 709 aa21.82■■□□□ 1.08
LTBP4-224ENST00000599016 IGHV1OR15-9A0A0B4J2B8 117 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 A0A1W2PQU0 124 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 IGLON5A6NGN9 336 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 NDUFS2O75306 463 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 BPIP17213 487 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 PSMA3P25788 255 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 SPAM1P38567 509 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 CSTF1Q05048 431 aaKnown RBP21.81■■□□□ 1.08
LTBP4-224ENST00000599016 SGCGQ13326 291 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 PTPRCAPQ14761 206 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 LONRF1Q17RB8 773 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 MAP7D1Q3KQU3 841 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 CAPN12Q6ZSI9 719 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 C3orf62Q6ZUJ4 267 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 CYP2U1Q7Z449 544 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 OR13J1Q8NGT2 312 aa21.81■■□□□ 1.08
LTBP4-224ENST00000599016 HNRNPLLQ8WVV9 542 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms