RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 PARS2Q7L3T8 475 aaKnown RBP23.32■■□□□ 1.32
SYMPK-212ENST00000598896 NDUFAF2Q8N183 169 aa23.32■■□□□ 1.32
SYMPK-212ENST00000598896 BANPQ8N9N5 519 aa23.32■■□□□ 1.32
SYMPK-212ENST00000598896 GPR150Q8NGU9 434 aa23.32■■□□□ 1.32
SYMPK-212ENST00000598896 PIP4K2CQ8TBX8 421 aa23.32■■□□□ 1.32
SYMPK-212ENST00000598896 CATSPERZQ9NTU4 200 aa23.32■■□□□ 1.32
SYMPK-212ENST00000598896 ATG2BQ96BY7 2078 aa23.32■■□□□ 1.32
SYMPK-212ENST00000598896 CKAP5Q14008 2032 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 C16orf96A6NNT2 1141 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 UPK3BL1B0FP48 263 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 UPK3BL2E5RIL1 263 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 GPR39O43194 453 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 EGFP01133 1207 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 IL9P15248 144 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 CHN1P15882 459 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 MC4RP32245 332 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 FOXN2P32314 431 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 TIE1P35590 1138 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 HADHAP40939 763 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 LEPRP48357 1165 aaKnown RBP23.31■■□□□ 1.32
SYMPK-212ENST00000598896 CDKN1CP49918 316 aaPredicted RBP23.31■■□□□ 1.32
SYMPK-212ENST00000598896 XIAPP98170 497 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 GUCY1A3Q02108 690 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 SLC18A2Q05940 514 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 TTC19Q6DKK2 380 aaPredicted RBP23.31■■□□□ 1.32
SYMPK-212ENST00000598896 CNSTQ6PJW8 725 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 LMNTD2Q8IXW0 634 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 TMIEQ8NEW7 156 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 GPR22Q99680 433 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 CNOT10Q9H9A5 744 aaKnown RBP23.31■■□□□ 1.32
SYMPK-212ENST00000598896 CAB39LQ9H9S4 337 aa23.31■■□□□ 1.32
SYMPK-212ENST00000598896 PRPF4O43172 522 aaKnown RBP eCLIP23.3■■□□□ 1.32
SYMPK-212ENST00000598896 PTSQ03393 145 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 TMEM196Q5HYL7 178 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 CMC1Q7Z7K0 106 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 SSU72Q9NP77 194 aaKnown RBP23.3■■□□□ 1.32
SYMPK-212ENST00000598896 PCDH12Q9NPG4 1184 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 GAPDHSO14556 408 aaPredicted RBP23.3■■□□□ 1.32
SYMPK-212ENST00000598896 S1PR4O95977 384 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 BPIP17213 487 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 CCNFP41002 786 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 CD151P48509 253 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 DNAJC3Q13217 504 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 MRNIPQ6NTE8 343 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 PSAPL1Q6NUJ1 521 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 TTC7BQ86TV6 843 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 ANKRD42Q8N9B4 389 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 HCAR2Q8TDS4 363 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 ISL2Q96A47 359 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 ARRDC3Q96B67 414 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 SGSM3Q96HU1 749 aa23.3■■□□□ 1.32
SYMPK-212ENST00000598896 COL6A3P12111 3177 aa23.29■■□□□ 1.32
SYMPK-212ENST00000598896 FAM47DPA6NHR8 397 aa23.29■■□□□ 1.32
SYMPK-212ENST00000598896 SHISA7A6NL88 538 aa23.29■■□□□ 1.32
SYMPK-212ENST00000598896 IL1BP01584 269 aa23.29■■□□□ 1.32
SYMPK-212ENST00000598896 RPA3P35244 121 aaPredicted RBP23.29■■□□□ 1.32
SYMPK-212ENST00000598896 MAGEA12P43365 314 aa23.29■■□□□ 1.32
SYMPK-212ENST00000598896 C2orf27AQ580R0 203 aa23.29■■□□□ 1.32
SYMPK-212ENST00000598896 GALNT7Q86SF2 657 aa23.29■■□□□ 1.32
SYMPK-212ENST00000598896 MMAAQ8IVH4 418 aaKnown RBP23.29■■□□□ 1.32
SYMPK-212ENST00000598896 PIANPQ8IYJ0 282 aa23.29■■□□□ 1.32
SYMPK-212ENST00000598896 GABPB2Q8TAK5 448 aaPredicted RBP23.29■■□□□ 1.32
SYMPK-212ENST00000598896 C8orf33Q9H7E9 229 aaPredicted RBP23.29■■□□□ 1.32
SYMPK-212ENST00000598896 MLXIPLQ9NP71 852 aa23.29■■□□□ 1.32
SYMPK-212ENST00000598896 SNX15Q9NRS6 342 aa23.29■■□□□ 1.32
SYMPK-212ENST00000598896 PCMTD2Q9NV79 361 aa23.29■■□□□ 1.32
SYMPK-212ENST00000598896 SUN2Q9UH99 717 aa23.29■■□□□ 1.32
SYMPK-212ENST00000598896 TOP3BO95985 862 aaKnown RBP23.28■■□□□ 1.32
SYMPK-212ENST00000598896 C1SP09871 688 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 OGNP20774 298 aaKnown RBP23.28■■□□□ 1.32
SYMPK-212ENST00000598896 ITGB7P26010 798 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 GMPRP36959 345 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 MDH1P40925 334 aaKnown RBP23.28■■□□□ 1.32
SYMPK-212ENST00000598896 STC1P52823 247 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 PGGT1BP53609 377 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 TYSND1Q2T9J0 566 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 FASTKD1Q53R41 847 aaKnown RBP23.28■■□□□ 1.32
SYMPK-212ENST00000598896 RFLNAQ6ZTI6 216 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 CDHR3Q6ZTQ4 885 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 MGARPQ8TDB4 240 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 ALKBH8Q96BT7 664 aaKnown RBP23.28■■□□□ 1.32
SYMPK-212ENST00000598896 APOPT1Q96IL0 206 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 C19orf43Q9BQ61 176 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 C12orf65Q9H3J6 166 aaKnown RBP23.28■■□□□ 1.32
SYMPK-212ENST00000598896 FAM96AQ9H5X1 160 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 IL26Q9NPH9 171 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 SMG5Q9UPR3 1016 aaKnown RBP23.28■■□□□ 1.32
SYMPK-212ENST00000598896 PLK4O00444 970 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 RALGDSQ12967 914 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 LRRC14Q15048 493 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 HABP4Q5JVS0 413 aaKnown RBP23.28■■□□□ 1.32
SYMPK-212ENST00000598896 RBM20Q5T481 1227 aaKnown RBP23.28■■□□□ 1.32
SYMPK-212ENST00000598896 FAM151BQ6UXP7 276 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 PBXIP1Q96AQ6 731 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 PRDM6Q9NQX0 595 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 SLC39A10Q9ULF5 831 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 ITM2BQ9Y287 266 aa23.28■■□□□ 1.32
SYMPK-212ENST00000598896 FAM95CA0A1B0GW59 222 aa23.27■■□□□ 1.32
SYMPK-212ENST00000598896 GOLGA8CPA6NN73 597 aa23.27■■□□□ 1.32
SYMPK-212ENST00000598896 NPC1O15118 1278 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms